Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CXCR4P61073 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CXCR4P61073 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
CXCR4P61073 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CXCR4P61073 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.09□□□□□ -1.6
CXCR4P61073 AL360270.2-201ENST00000562952 5985 ntBASIC5.09□□□□□ -1.6
CXCR4P61073 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CXCR4P61073 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCR4P61073 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CXCR4P61073 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CXCR4P61073 YWHAZP6-201ENST00000399764 738 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 PCNPP4-201ENST00000414817 517 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCR4P61073 RPSAP32-201ENST00000432681 526 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 GAPDHP48-201ENST00000436626 961 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 TUBB4BP6-201ENST00000437576 479 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 AC073909.1-201ENST00000447112 999 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.08□□□□□ -1.6
CXCR4P61073 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.08□□□□□ -1.6
CXCR4P61073 HMGB1P7-201ENST00000450921 612 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCR4P61073 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.08□□□□□ -1.6
CXCR4P61073 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CXCR4P61073 SNRPCP11-201ENST00000492453 205 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 RN7SL362P-201ENST00000494228 267 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.08□□□□□ -1.6
CXCR4P61073 CDC42P3-201ENST00000518493 633 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 AC068993.1-201ENST00000546724 589 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 AC092332.1-201ENST00000563684 829 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCR4P61073 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CXCR4P61073 RN7SL230P-201ENST00000580835 303 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCR4P61073 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.08□□□□□ -1.6
CXCR4P61073 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 AC015819.1-201ENST00000613588 663 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 AC004801.6-201ENST00000616571 978 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 AL136228.1-201ENST00000622221 319 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.08□□□□□ -1.6
CXCR4P61073 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCR4P61073 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
CXCR4P61073 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CXCR4P61073 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CXCR4P61073 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 AC008079.2-201ENST00000623543 20396 ntBASIC5.08□□□□□ -1.6
CXCR4P61073 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CXCR4P61073 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.08□□□□□ -1.6
CXCR4P61073 MTCO1P15-201ENST00000529569 1526 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCR4P61073 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CXCR4P61073 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCR4P61073 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CXCR4P61073 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCR4P61073 AC017079.1-201ENST00000333650 415 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
CXCR4P61073 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCR4P61073 RN7SKP74-201ENST00000362849 309 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CXCR4P61073 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCR4P61073 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCR4P61073 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCR4P61073 GAPDHP59-201ENST00000435908 267 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 GTF3AP5-201ENST00000442645 697 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 AL356121.1-201ENST00000442911 156 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CXCR4P61073 AC005077.1-201ENST00000449226 375 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 GEMIN2P1-201ENST00000454246 752 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.07□□□□□ -1.6
CXCR4P61073 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.07□□□□□ -1.6
CXCR4P61073 RN7SL570P-201ENST00000484405 292 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 OR11I1P-201ENST00000486033 954 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCR4P61073 AL158068.1-201ENST00000506116 616 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCR4P61073 NACAP5-201ENST00000509863 636 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCR4P61073 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCR4P61073 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCR4P61073 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.07□□□□□ -1.6
CXCR4P61073 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCR4P61073 AP006245.2-201ENST00000522004 300 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 AP000859.1-201ENST00000525536 307 ntBASIC5.07□□□□□ -1.6
CXCR4P61073 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.07□□□□□ -1.6
CXCR4P61073 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms