Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.62□□□□□ -1.51
HMGCLP35914 AC079776.5-201ENST00000641920 211 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HMGCLP35914 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HMGCLP35914 AC004076.2-201ENST00000620532 3323 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.62□□□□□ -1.51
HMGCLP35914 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HMGCLP35914 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGCLP35914 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
HMGCLP35914 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCLP35914 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCLP35914 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HMGCLP35914 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCLP35914 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCLP35914 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HMGCLP35914 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCLP35914 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HMGCLP35914 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCLP35914 RNA5SP326-201ENST00000363209 110 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 HCFC2P1-201ENST00000392864 1592 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 YES1P1-201ENST00000418510 1628 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 AL355994.1-201ENST00000424379 260 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGCLP35914 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCLP35914 HMGN1P36-201ENST00000446623 298 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCLP35914 PPIAP19-201ENST00000486414 492 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 NPM1P28-201ENST00000492269 840 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCLP35914 AC138866.2-201ENST00000508650 584 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCLP35914 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.61□□□□□ -1.51
HMGCLP35914 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.61□□□□□ -1.51
HMGCLP35914 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCLP35914 AC008521.2-201ENST00000591021 259 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 AC025857.2-201ENST00000602711 238 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 AC002069.2-201ENST00000603580 883 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCLP35914 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCLP35914 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCLP35914 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 CU639417.4-201ENST00000623928 207 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 AC138907.8-201ENST00000623981 2256 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 AC007683.2-201ENST00000624681 714 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 AC009950.2-201ENST00000636548 183 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCLP35914 AC000095.2-202ENST00000637415 154 ntBASIC5.61□□□□□ -1.51
HMGCLP35914 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCLP35914 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HMGCLP35914 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCLP35914 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCLP35914 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCLP35914 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCLP35914 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCLP35914 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCLP35914 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCLP35914 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCLP35914 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCLP35914 AC114786.1-201ENST00000512892 1415 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCLP35914 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HMGCLP35914 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HMGCLP35914 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCLP35914 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCLP35914 RNA5SP122-201ENST00000384457 108 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HMGCLP35914 AL009179.1-201ENST00000406085 265 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGCLP35914 AL596448.1-201ENST00000415024 392 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 AL354868.1-201ENST00000417077 482 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCLP35914 GAPDHP34-201ENST00000432112 823 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCLP35914 RPL12P11-201ENST00000439970 501 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.6□□□□□ -1.51
HMGCLP35914 AC073072.2-201ENST00000447425 348 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 AL450023.1-201ENST00000450868 751 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.6□□□□□ -1.51
HMGCLP35914 LDHBP2-201ENST00000456969 1005 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 RPS27AP2-201ENST00000457576 465 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCLP35914 AC109481.1-201ENST00000509173 282 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCLP35914 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGCLP35914 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.6□□□□□ -1.51
HMGCLP35914 TMEM97P2-201ENST00000517841 403 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGCLP35914 AC122688.1-201ENST00000541494 223 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCLP35914 AL049872.1-201ENST00000556323 322 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCLP35914 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCLP35914 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCLP35914 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.6□□□□□ -1.51
HMGCLP35914 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.6□□□□□ -1.51
HMGCLP35914 H3F3BP2-201ENST00000583907 357 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.6□□□□□ -1.51
HMGCLP35914 AP001542.1-201ENST00000591314 200 ntBASIC5.6□□□□□ -1.51
HMGCLP35914 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms