Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 AL606537.1-201ENST00000607258 2011 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 AC015799.1-201ENST00000622996 3122 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
ABCD3P28288 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.62□□□□□ -1.51
ABCD3P28288 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ABCD3P28288 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 RNU6-792P-201ENST00000363490 107 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 RNU105B-201ENST00000364478 208 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 HMGB1P10-201ENST00000395823 563 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 AL451046.1-201ENST00000406097 534 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 RN7SKP151-201ENST00000410230 316 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 RNU4-74P-201ENST00000411280 161 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 AL096829.1-201ENST00000413677 457 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 RPS15AP30-201ENST00000420976 390 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 RPL12P12-201ENST00000424633 501 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.62□□□□□ -1.51
ABCD3P28288 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 TRIM60P16-201ENST00000444048 694 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 FTLP8-201ENST00000446770 267 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 RAB28P2-201ENST00000454299 641 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 SEPT7P3-201ENST00000455017 621 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 EIF2S2P5-201ENST00000457635 968 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 PSMC1P13-201ENST00000458195 985 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 AC037198.2-201ENST00000478845 733 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 AP002884.1-201ENST00000479691 655 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 CDH12P2-201ENST00000504393 298 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 AL158068.1-201ENST00000506116 616 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.62□□□□□ -1.51
ABCD3P28288 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.62□□□□□ -1.51
ABCD3P28288 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 IGKV3D-25-201ENST00000519599 235 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 OR56A7P-201ENST00000524865 941 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.62□□□□□ -1.51
ABCD3P28288 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.62□□□□□ -1.51
ABCD3P28288 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.62□□□□□ -1.51
ABCD3P28288 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.62□□□□□ -1.51
ABCD3P28288 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.62□□□□□ -1.51
ABCD3P28288 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.62□□□□□ -1.51
ABCD3P28288 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.62□□□□□ -1.51
ABCD3P28288 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.62□□□□□ -1.51
ABCD3P28288 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.62□□□□□ -1.51
ABCD3P28288 AC068768.2-201ENST00000602352 343 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 AL645933.2-201ENST00000606743 1207 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 AC092266.1-201ENST00000610958 165 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 AC021106.3-201ENST00000623925 531 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.62□□□□□ -1.51
ABCD3P28288 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.62□□□□□ -1.51
ABCD3P28288 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.62□□□□□ -1.51
ABCD3P28288 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.62□□□□□ -1.51
ABCD3P28288 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 AL354854.1-201ENST00000455940 1363 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 RBPJP2-201ENST00000618187 1444 ntBASIC5.62□□□□□ -1.51
ABCD3P28288 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.62□□□□□ -1.51
ABCD3P28288 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ABCD3P28288 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.62□□□□□ -1.51
ABCD3P28288 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
ABCD3P28288 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
ABCD3P28288 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
ABCD3P28288 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ABCD3P28288 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
ABCD3P28288 AL034546.1-201ENST00000623740 3693 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ABCD3P28288 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
ABCD3P28288 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ABCD3P28288 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ABCD3P28288 COX6B1P3-201ENST00000312310 260 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ABCD3P28288 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.61□□□□□ -1.51
ABCD3P28288 RBMY1HP-201ENST00000382759 1389 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.61□□□□□ -1.51
ABCD3P28288 IFIT1P1-201ENST00000400497 1449 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.61□□□□□ -1.51
ABCD3P28288 AC245096.1-201ENST00000413104 546 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.61□□□□□ -1.51
ABCD3P28288 AL160175.1-201ENST00000428124 247 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms