Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AL360270.2-201ENST00000562952 5985 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AL031123.3-201ENST00000623345 1837 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AP004607.3-201ENST00000530354 3915 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 RNU1-136P-201ENST00000384181 164 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 ADAM24P-201ENST00000398655 2101 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 HMGB1P20-201ENST00000402555 677 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 RN7SKP29-201ENST00000410957 272 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 BX119904.3-201ENST00000428194 957 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 HMGB3P24-201ENST00000433260 622 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC002504.1-201ENST00000438281 691 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 RPS12P17-201ENST00000438591 377 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC004129.2-201ENST00000457229 287 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC022215.1-201ENST00000481770 362 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 NPM1P28-201ENST00000492269 840 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 GAPDHP62-201ENST00000515313 990 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC125612.1-201ENST00000547580 377 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC020978.7-201ENST00000575953 1187 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 MIR4505-201ENST00000582238 73 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AL583832.1-201ENST00000603227 784 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 RPL12P48-201ENST00000605620 304 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 MIR6826-201ENST00000617808 98 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 MIR6886-201ENST00000619864 61 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC011933.2-201ENST00000578539 2790 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AL034546.1-201ENST00000623740 3693 ntBASIC4.56□□□□□ -1.68
TCRBV4S1A1TA0A5B7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 RPS2P45-201ENST00000469997 2057 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 MIR143-201ENST00000385300 106 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 RMRPP5-201ENST00000411156 267 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 OR10T1P-201ENST00000424327 947 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 RPS27AP6-201ENST00000427962 448 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 RPS27AP2-201ENST00000457576 465 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC093166.4-201ENST00000457867 318 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC105384.2-201ENST00000508433 640 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 SCARNA6.1-201ENST00000516989 238 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC007225.2-201ENST00000562529 256 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 FO393422.1-201ENST00000603908 708 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 BX323046.1-201ENST00000610145 535 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 RN7SL544P-201ENST00000617232 284 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 RN7SL763P-201ENST00000620922 284 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AL390318.1-201ENST00000624564 687 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 OR11H2-202ENST00000641517 1085 ntBASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.55□□□□□ -1.68
TCRBV4S1A1TA0A5B7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms