Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL4A3BPQ9Y5P4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC010329.1-201ENST00000593903 8328 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 SNORD56.4-201ENST00000363883 71 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 RN7SKP28-201ENST00000364770 305 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 LCN1P2-201ENST00000372030 223 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 RN7SKP121-201ENST00000410842 305 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 EIF4A1P1-201ENST00000420241 934 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 RPS7P14-201ENST00000426405 583 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 FO393419.3-201ENST00000428741 282 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC002069.1-201ENST00000429649 1159 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC097499.1-201ENST00000444277 208 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AL590004.3-202ENST00000445883 451 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC103563.5-201ENST00000455643 364 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC037198.2-201ENST00000478845 733 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 RNA5SP400-201ENST00000517155 111 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 MIR4701-201ENST00000583094 63 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 SS18L2P2-201ENST00000583960 235 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC023510.2-201ENST00000622162 746 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 AC083865.1-201ENST00000636634 831 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 SMG1P7-201ENST00000565246 2704 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 MFSD8-213ENST00000641134 1327 ntBASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.96□□□□□ -1.3
COL4A3BPQ9Y5P4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AC034229.2-201ENST00000566945 2508 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 RNU6-244P-201ENST00000391028 104 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 OR7E156P-201ENST00000400303 464 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AL445238.1-204ENST00000400311 463 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 RPS17P17-201ENST00000419392 409 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 NME1P1-201ENST00000420914 382 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 DPY19L1P2-201ENST00000426647 915 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AC005189.1-201ENST00000431286 310 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 IGLV3-4-201ENST00000432300 244 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 RPL5P10-201ENST00000445207 894 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 Z83838.1-202ENST00000456225 839 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 RANP2-201ENST00000456833 229 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 RN7SL221P-201ENST00000466190 281 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AL358913.1-201ENST00000554342 121 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 OR4H6P-201ENST00000563771 921 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 MRPS21P8-201ENST00000569196 235 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 MIR3189-201ENST00000578735 73 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 DYNLL1P1-201ENST00000595442 269 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 RNU6-1192P-201ENST00000612197 107 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 RNU6-489P-201ENST00000618289 107 ntBASIC6.95□□□□□ -1.3
COL4A3BPQ9Y5P4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms