Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 OR56A4-201ENST00000330728 1209 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 SNORA10B-201ENST00000384458 133 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 RNA5SP23-201ENST00000391006 105 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC092952.1-201ENST00000397646 1209 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC025750.1-201ENST00000399891 379 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 RN7SL308P-201ENST00000464971 297 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 RPS3AP14-201ENST00000483907 780 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC022447.3-201ENST00000506865 495 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 OR5AP1P-201ENST00000529730 940 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 CBX3P5-201ENST00000552017 521 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 FDPSP3-201ENST00000556903 1013 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 RPS3AP23-202ENST00000574601 686 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 FAM106CP-201ENST00000582212 507 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 MIR3159-201ENST00000584572 74 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 YWHAQP7-201ENST00000603536 658 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 MARK3P1-201ENST00000604796 643 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC004014.2-201ENST00000623718 5122 ntBASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.54□□□□□ -1.2
PCDHB11Q9Y5F2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 RNU6-619P-201ENST00000365146 108 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 MT-TP-201ENST00000387461 68 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC007559.1-201ENST00000428736 355 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 RAD23BP3-201ENST00000454157 1152 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 BX248409.1-201ENST00000455497 255 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC112206.1-201ENST00000468416 477 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 NDUFS5P2-201ENST00000484004 306 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 RN7SL388P-201ENST00000498736 339 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC106760.2-201ENST00000504159 619 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC106774.2-201ENST00000510266 406 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 PANCR-202ENST00000513690 448 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC084337.1-201ENST00000524809 686 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms