Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AC079097.1-201ENST00000512187 1399 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 PABPC1P9-201ENST00000426076 1612 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 RNU6-254P-201ENST00000363377 107 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 MIR606-201ENST00000384851 96 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 MIR431-201ENST00000385266 114 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 RN7SKP261-201ENST00000410948 278 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 VN1R33P-201ENST00000411800 887 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 HMGB3P23-201ENST00000414981 585 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 RPS3AP9-201ENST00000417027 792 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AL121878.1-201ENST00000418638 859 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 GTF2IP23-201ENST00000423746 351 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AC009303.1-201ENST00000426307 352 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 GAPDHP34-201ENST00000432112 823 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 GAPDHP32-201ENST00000433816 998 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 FMO7P-201ENST00000436045 768 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AC244505.5-201ENST00000443639 207 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 RBMY2TP-201ENST00000451162 947 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 CALM1P2-201ENST00000452941 448 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 RPL7AP52-201ENST00000458096 790 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 RNU7-140P-201ENST00000459546 60 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 RN7SL335P-201ENST00000482790 304 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AC079944.1-201ENST00000485426 495 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 RN7SL388P-201ENST00000498736 339 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 CDH12P2-201ENST00000504393 298 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 IGKV3D-31-201ENST00000519131 281 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 OR4A12P-201ENST00000530847 918 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 NPIPB14P-203ENST00000532298 987 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 FDPSP3-201ENST00000556903 1013 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AC015917.1-201ENST00000579654 510 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AP001542.2-201ENST00000593141 364 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AC073091.2-201ENST00000603205 907 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 OR52B5P-202ENST00000641118 1110 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 MTCO1P9-201ENST00000505577 1534 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 AL023806.3-201ENST00000638502 2704 ntBASIC7.5□□□□□ -1.21
CUEDC1Q9NWM3 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 MTCO1P23-201ENST00000415223 1526 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 PARP4P1-201ENST00000435945 2337 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 RPL10P16-201ENST00000325000 645 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 IARS-201ENST00000375627 697 ntTSL 3 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 RNU6-877P-201ENST00000383868 107 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 MIR142-201ENST00000384835 87 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 RNA5SP80-201ENST00000410475 111 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 GSTA10P-201ENST00000412182 576 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 RPL12P27-201ENST00000414870 496 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC007435.1-201ENST00000421086 415 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AKR1B10P1-201ENST00000425765 942 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AL035410.1-201ENST00000427409 427 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC073464.1-201ENST00000429823 534 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AC242426.1-201ENST00000435270 960 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 AL512882.1-201ENST00000436086 832 ntBASIC7.49□□□□□ -1.21
CUEDC1Q9NWM3 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms