Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MIR4311-201ENST00000580794 100 ntBASIC5.22□□□□□ -1.57
CHD8Q9HCK8 AC020765.1-201ENST00000604296 328 ntBASIC5.22□□□□□ -1.57
CHD8Q9HCK8 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 TTC3P1-201ENST00000399586 6081 ntBASIC5.22□□□□□ -1.57
CHD8Q9HCK8 Z98755.1-201ENST00000407015 1384 ntBASIC5.22□□□□□ -1.57
CHD8Q9HCK8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 RNU4-2-201ENST00000365668 141 ntBASIC5.22□□□□□ -1.57
CHD8Q9HCK8 AC023141.8-201ENST00000442554 208 ntBASIC5.22□□□□□ -1.57
CHD8Q9HCK8 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 EIF3KP3-201ENST00000514461 639 ntBASIC5.22□□□□□ -1.57
CHD8Q9HCK8 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHD8Q9HCK8 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 OR2M1P-201ENST00000318104 951 ntBASIC5.21□□□□□ -1.57
CHD8Q9HCK8 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.21□□□□□ -1.57
CHD8Q9HCK8 CEACAMP8-201ENST00000413902 580 ntBASIC5.21□□□□□ -1.57
CHD8Q9HCK8 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 AC015864.1-201ENST00000496512 544 ntBASIC5.21□□□□□ -1.57
CHD8Q9HCK8 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.21□□□□□ -1.57
CHD8Q9HCK8 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.21□□□□□ -1.58
CHD8Q9HCK8 CASC19-255ENST00000641733 1385 ntBASIC5.21□□□□□ -1.58
CHD8Q9HCK8 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 SNORA17.1-201ENST00000362945 126 ntBASIC5.21□□□□□ -1.58
CHD8Q9HCK8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 AC093720.1-201ENST00000505681 714 ntBASIC5.21□□□□□ -1.58
CHD8Q9HCK8 AC004980.4-201ENST00000513375 203 ntBASIC5.21□□□□□ -1.58
CHD8Q9HCK8 MIR4260-201ENST00000583107 67 ntBASIC5.21□□□□□ -1.58
CHD8Q9HCK8 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 AC109583.2-201ENST00000617367 129 ntBASIC5.21□□□□□ -1.58
CHD8Q9HCK8 AC090527.3-201ENST00000619041 548 ntBASIC5.21□□□□□ -1.58
CHD8Q9HCK8 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC5.21□□□□□ -1.58
CHD8Q9HCK8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 U3.22-201ENST00000391120 215 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AC092106.1-201ENST00000444291 373 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AL358232.1-201ENST00000448030 501 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 RPL23AP60-201ENST00000450011 454 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AC111000.3-201ENST00000508057 576 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 OR8G5-201ENST00000524943 1041 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 UBE2FP2-201ENST00000566646 462 ntBASIC5.2□□□□□ -1.58
CHD8Q9HCK8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CHD8Q9HCK8 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms