Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AL034546.1-201ENST00000623740 3693 ntBASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 RNU6-398P-201ENST00000384143 109 ntBASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 AC019050.1-201ENST00000418508 492 ntBASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 AC093162.1-201ENST00000419682 124 ntBASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 AC073648.4-201ENST00000442655 781 ntBASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 AC092490.3-201ENST00000545370 572 ntBASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 AL683813.2-201ENST00000605245 502 ntBASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 AC091905.4-201ENST00000623432 202 ntBASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
SHANK3Q9BYB0 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 AC079777.1-201ENST00000623836 1953 ntBASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 AL121977.1-201ENST00000401636 979 ntBASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 AC097484.1-201ENST00000471148 389 ntBASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 RPL17P2-201ENST00000491913 451 ntBASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 AC026402.1-201ENST00000513642 170 ntBASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 MIR5096-201ENST00000583713 70 ntBASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 AL133481.2-203ENST00000607558 139 ntBASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHANK3Q9BYB0 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.02□□□□□ -1.28
SHANK3Q9BYB0 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
SHANK3Q9BYB0 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 RNU4-2-201ENST00000365668 141 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 AL049693.1-201ENST00000402760 611 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 AL133482.1-201ENST00000415988 498 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 GTF2IP2-201ENST00000424290 697 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 AL365220.1-201ENST00000432923 399 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 TDGF1P1-201ENST00000445734 527 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 NDUFA12P1-201ENST00000455914 406 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 Z92846.1-201ENST00000456203 268 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 AC079080.1-201ENST00000479841 822 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 SCARNA16.4-201ENST00000516956 187 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 OR5AN2P-201ENST00000534535 896 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 AC011447.4-201ENST00000587562 111 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 AC015660.5-201ENST00000623238 564 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 AC104581.5-201ENST00000624171 7141 ntBASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.02□□□□□ -1.29
SHANK3Q9BYB0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms