Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC113412.1-201ENST00000425840 504 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AC007000.2-201ENST00000442564 487 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AL606490.1-201ENST00000452266 765 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AL157777.1-201ENST00000468100 304 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 SSR3-208ENST00000496050 579 ntTSL 4 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AC016550.3-201ENST00000515706 767 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 RNA5SP92-201ENST00000516437 110 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 SCARNA6.1-201ENST00000516989 238 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 TPM3P3-201ENST00000521343 354 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 CKS1BP1-201ENST00000555221 240 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AC092868.3-201ENST00000560515 784 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AC018558.5-201ENST00000565840 952 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 MIR4260-201ENST00000583107 67 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AC011497.2-201ENST00000600255 639 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 KATNBL1P5-201ENST00000605015 517 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AC012213.4-201ENST00000606457 354 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 AL096803.3-201ENST00000609032 532 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 SRRM1P3-201ENST00000426911 2678 ntBASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
RTFDC1Q9BY42 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC116158.1-201ENST00000560231 2129 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 RNA5SP183-201ENST00000362452 119 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 RNU6-1251P-201ENST00000364502 107 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 RNU6-316P-201ENST00000391027 107 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 MTCO1P51-201ENST00000427672 1060 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AK3P5-201ENST00000432033 519 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 ZNF965P-201ENST00000432501 817 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC006326.1-201ENST00000445465 787 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AL022319.1-201ENST00000458183 1167 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 EIF1P7-201ENST00000487533 337 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 CCDC11P1-201ENST00000503137 1162 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC024558.1-201ENST00000505008 528 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC016550.1-201ENST00000505348 785 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC093510.2-201ENST00000562820 896 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 DNAJC19P3-201ENST00000594491 331 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC010245.2-201ENST00000606908 1167 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 MIR6798-201ENST00000612887 67 ntBASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RTFDC1Q9BY42 AC092111.2-201ENST00000611627 1414 ntBASIC7.15□□□□□ -1.27
RTFDC1Q9BY42 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
RTFDC1Q9BY42 AL592429.1-201ENST00000403909 1473 ntBASIC7.15□□□□□ -1.27
RTFDC1Q9BY42 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
RTFDC1Q9BY42 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
RTFDC1Q9BY42 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
RTFDC1Q9BY42 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.15□□□□□ -1.27
RTFDC1Q9BY42 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.14□□□□□ -1.27
RTFDC1Q9BY42 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RTFDC1Q9BY42 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms