Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SSX3Q99909 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.08□□□□□ -1.6
SSX3Q99909 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 AC027281.1-201ENST00000574178 758 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 AC233702.7-202ENST00000582941 211 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 AC124916.2-201ENST00000604416 224 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 AL499605.1-201ENST00000604628 403 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 AC092681.3-201ENST00000609463 678 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SSX3Q99909 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC073488.6-201ENST00000632293 754 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 AC103703.1-201ENST00000634783 663 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 SAMMSON-209ENST00000641222 1100 ntBASIC5.08□□□□□ -1.6
SSX3Q99909 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSX3Q99909 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SSX3Q99909 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSX3Q99909 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSX3Q99909 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.07□□□□□ -1.6
SSX3Q99909 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX3Q99909 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SSX3Q99909 AC092692.1-201ENST00000623625 2595 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX3Q99909 SNORD1C-201ENST00000363315 78 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 RNU6-618P-201ENST00000363518 112 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 RNU6-670P-201ENST00000364312 104 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 RNA5SP478-201ENST00000364657 115 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 RNU4-7P-201ENST00000364758 141 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SSX3Q99909 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 AC115283.1-201ENST00000427353 400 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX3Q99909 SCAND3P1-201ENST00000439854 1060 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.07□□□□□ -1.6
SSX3Q99909 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX3Q99909 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSX3Q99909 AL133351.3-201ENST00000454998 193 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 VPS25P1-201ENST00000455691 508 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 AC023424.1-201ENST00000496058 459 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 PFN1P8-201ENST00000497012 543 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX3Q99909 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.07□□□□□ -1.6
SSX3Q99909 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.07□□□□□ -1.6
SSX3Q99909 SEC11B-201ENST00000518383 499 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 AC009879.1-201ENST00000520029 839 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 OR10D4P-201ENST00000525892 951 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX3Q99909 AP002373.2-201ENST00000541631 1060 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX3Q99909 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX3Q99909 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX3Q99909 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX3Q99909 AC134669.1-201ENST00000581275 672 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 AC079315.1-201ENST00000602952 623 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 AC023813.4-201ENST00000607580 580 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 AC007620.3-201ENST00000608131 497 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 AL008723.3-201ENST00000608926 449 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX3Q99909 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 MIR7159-201ENST00000620587 66 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX3Q99909 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.07□□□□□ -1.6
SSX3Q99909 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX3Q99909 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX3Q99909 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SSX3Q99909 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX3Q99909 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.07□□□□□ -1.6
SSX3Q99909 GUCY1B2-204ENST00000531898 1979 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 SOCS5P3-201ENST00000425115 1576 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 CASC19-281ENST00000642118 1554 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 AC018809.2-201ENST00000602436 3823 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SSX3Q99909 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms