Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 RNU6-224P-201ENST00000384055 107 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 SNORD94-201ENST00000386037 137 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 RNA5SP53-201ENST00000391299 120 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 RNA5SP280-201ENST00000411230 115 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 EEF1GP7-201ENST00000422983 703 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 VN1R42P-201ENST00000424651 344 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 GAPDHP51-201ENST00000426454 1000 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 MTND1P28-201ENST00000435623 950 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 PA2G4P6-201ENST00000438325 1197 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 RPS18P1-201ENST00000447840 458 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC016724.1-201ENST00000453215 421 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 DNAJC19P1-201ENST00000455312 319 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 RPL37P23-201ENST00000492641 294 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 PFN2-217ENST00000498307 556 ntTSL 4 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 RNF138P1-201ENST00000502765 546 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 MTCYBP43-201ENST00000513621 740 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC106038.2-201ENST00000520706 568 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 BUD31P1-201ENST00000521828 359 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 SETP17-201ENST00000534163 817 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC087897.1-201ENST00000550134 156 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 ANP32BP1-202ENST00000568553 737 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC012435.1-202ENST00000568772 240 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC007346.1-201ENST00000569208 867 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC096708.2-201ENST00000577676 512 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 MIR4470-201ENST00000583453 72 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AP000860.1-201ENST00000605250 559 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC116312.1-201ENST00000606841 314 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AC004908.2-201ENST00000609090 574 ntBASIC8.38□□□□□ -1.07
TRIM47Q96LD4 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM47Q96LD4 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 HSPA8P11-201ENST00000508840 1898 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 MTHFD2P5-201ENST00000320415 844 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 RPL7P8-201ENST00000411964 730 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 RPSAP60-201ENST00000415403 880 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 FDPSP1-201ENST00000424976 1071 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC092427.1-201ENST00000439177 601 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 MTCYBP6-201ENST00000441810 138 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AL354714.5-201ENST00000450131 590 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 RPL7P1-201ENST00000468161 747 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 RPL7P9-201ENST00000468715 747 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC091982.1-202ENST00000473923 343 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC037198.2-201ENST00000478845 733 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 RN7SL306P-201ENST00000492941 296 ntBASIC8.37□□□□□ -1.07
TRIM47Q96LD4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM47Q96LD4 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms