Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RN7SL149P-201ENST00000465197 281 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 RN7SL36P-201ENST00000469345 276 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LRCH3Q96II8 AC007182.2-201ENST00000489251 402 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 SNX5P1-201ENST00000505757 1041 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 AP004833.3-201ENST00000531893 322 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 MRPL40P1-201ENST00000542687 604 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 AL117187.1-201ENST00000555482 181 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 WDR61-205ENST00000558459 884 ntTSL 3 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 AC009977.1-201ENST00000586015 570 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 AC007136.1-201ENST00000589141 199 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 OR5AH1P-201ENST00000595968 283 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 AC112191.3-201ENST00000604371 277 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 AL499605.1-201ENST00000604628 403 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 AC018695.5-201ENST00000605872 315 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 MIR6729-201ENST00000618194 65 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 AC093591.3-201ENST00000634516 308 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LRCH3Q96II8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LRCH3Q96II8 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LRCH3Q96II8 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LRCH3Q96II8 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LRCH3Q96II8 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LRCH3Q96II8 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LRCH3Q96II8 AC010928.1-201ENST00000592477 1447 ntBASIC8.45□□□□□ -1.06
LRCH3Q96II8 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LRCH3Q96II8 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LRCH3Q96II8 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
LRCH3Q96II8 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 PRDM10-205ENST00000526082 3308 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 TARS2P1-201ENST00000506124 2041 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 Y_RNA.445-201ENST00000384168 102 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 RN7SKP148-201ENST00000410179 275 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 HMGN1P34-201ENST00000413023 290 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC114482.1-201ENST00000418010 247 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 GAPDHP19-201ENST00000431768 1005 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 SEPT7P5-201ENST00000434048 306 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 LINC00460-201ENST00000435024 631 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 Z97634.1-203ENST00000435229 471 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 RPL31P11-202ENST00000454082 372 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC010301.1-201ENST00000473936 355 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 HMGB1P41-201ENST00000520234 440 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 OR5M4P-201ENST00000529436 925 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 NIFKP8-201ENST00000560500 874 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 AC091905.1-201ENST00000624400 311 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 DDX50P1-201ENST00000438163 2400 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 EEF1A1P22-201ENST00000559385 1380 ntBASIC8.44□□□□□ -1.06
LRCH3Q96II8 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
LRCH3Q96II8 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.44□□□□□ -1.06
LRCH3Q96II8 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms