Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.79□□□□□ -1.48
VMP1Q96GC9 BMS1P7-201ENST00000602440 1052 ntBASIC5.79□□□□□ -1.48
VMP1Q96GC9 AC092681.3-201ENST00000609463 678 ntBASIC5.79□□□□□ -1.48
VMP1Q96GC9 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.79□□□□□ -1.48
VMP1Q96GC9 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VMP1Q96GC9 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.79□□□□□ -1.48
VMP1Q96GC9 AC107027.3-201ENST00000565095 3473 ntBASIC5.79□□□□□ -1.48
VMP1Q96GC9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.79□□□□□ -1.48
VMP1Q96GC9 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VMP1Q96GC9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VMP1Q96GC9 MFSD8-219ENST00000641228 2559 ntBASIC5.79□□□□□ -1.48
VMP1Q96GC9 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.79□□□□□ -1.48
VMP1Q96GC9 AC132825.1-201ENST00000463573 2247 ntBASIC5.79□□□□□ -1.48
VMP1Q96GC9 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VMP1Q96GC9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VMP1Q96GC9 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.79□□□□□ -1.48
VMP1Q96GC9 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VMP1Q96GC9 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VMP1Q96GC9 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.79□□□□□ -1.48
VMP1Q96GC9 PCAT14-202ENST00000627127 3935 ntBASIC5.79□□□□□ -1.48
VMP1Q96GC9 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.79□□□□□ -1.48
VMP1Q96GC9 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC104966.1-201ENST00000467010 1464 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VMP1Q96GC9 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VMP1Q96GC9 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 LINC01963-201ENST00000562038 3148 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VMP1Q96GC9 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VMP1Q96GC9 RNU6-819P-201ENST00000364116 107 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 RN7SKP81-201ENST00000365603 331 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 MT-TP-201ENST00000387461 68 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 SNORA11.5-201ENST00000408163 128 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 RNU6-564P-201ENST00000410983 104 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 RPS7P8-201ENST00000418311 581 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC130360.1-201ENST00000425489 1117 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 BX276092.6-201ENST00000430476 250 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC007679.3-201ENST00000434035 414 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 KRT8P51-201ENST00000438938 274 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 SCAND3P1-201ENST00000439854 1060 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 OSTCP1-201ENST00000455507 450 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 BX276092.8-201ENST00000455722 250 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 RPSAP39-201ENST00000467439 883 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 SNORA70.17-201ENST00000516449 133 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 Y_RNA.710-201ENST00000516975 110 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC130365.2-201ENST00000525882 1201 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 TOMM20P1-201ENST00000534518 427 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC009268.1-201ENST00000561352 1203 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VMP1Q96GC9 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 AL591167.1-201ENST00000607321 456 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC023813.4-201ENST00000607580 580 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 AC092159.4-201ENST00000624944 550 ntBASIC5.78□□□□□ -1.48
VMP1Q96GC9 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VMP1Q96GC9 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VMP1Q96GC9 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VMP1Q96GC9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.78□□□□□ -1.48
VMP1Q96GC9 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
VMP1Q96GC9 HSPD1P9-201ENST00000420325 1636 ntBASIC5.77□□□□□ -1.48
VMP1Q96GC9 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VMP1Q96GC9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VMP1Q96GC9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VMP1Q96GC9 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VMP1Q96GC9 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VMP1Q96GC9 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VMP1Q96GC9 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VMP1Q96GC9 SNORA43.1-201ENST00000364863 140 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.77□□□□□ -1.49
VMP1Q96GC9 ST13P16-201ENST00000401760 781 ntBASIC5.77□□□□□ -1.49
VMP1Q96GC9 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms