Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 Y_RNA.599-201ENST00000410489 109 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 RN7SKP188-201ENST00000410789 317 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 BTF3P8-201ENST00000414577 526 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 ELOCP9-201ENST00000418624 239 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AC021876.1-201ENST00000425959 359 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 HIGD1AP12-201ENST00000427832 281 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AC005189.1-201ENST00000431286 310 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 COL11A2P1-205ENST00000441798 676 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 ZNF736P5Y-201ENST00000451173 805 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 RNA5SP303-201ENST00000516192 130 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 HMGB1P1-201ENST00000522557 636 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AC008429.2-201ENST00000523057 864 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AP003461.1-201ENST00000528866 78 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 SETP1-201ENST00000556014 845 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AL020997.3-201ENST00000602843 359 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AL589743.6-201ENST00000611025 117 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AL138478.1-201ENST00000612252 832 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 U1.41-201ENST00000617626 165 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 MIR6823-201ENST00000622118 61 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 BX005019.1-201ENST00000561881 1810 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TRIM48Q8IWZ4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AP003486.1-201ENST00000525716 3994 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC087392.3-202ENST00000358446 1754 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC023245.2-201ENST00000530760 2978 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC010132.2-201ENST00000295493 1043 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 RNU6-623P-201ENST00000363143 105 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 SNORD113-6-201ENST00000363345 75 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 RNA5SP485-201ENST00000365053 119 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 RNU6-83P-201ENST00000384568 112 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 RN7SKP129-201ENST00000410288 299 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 DLGAP5P1-201ENST00000430307 464 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 RPS27AP8-201ENST00000452665 445 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 NECAP1P2-201ENST00000455668 727 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 SULT1D1P-201ENST00000458020 882 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC098818.1-201ENST00000478593 252 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC117395.1-201ENST00000487390 403 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 RN7SL649P-201ENST00000496974 275 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms