Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NPAS4Q8IUM7 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AP000776.1-201ENST00000530032 1663 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 RNU1-65P-201ENST00000363919 148 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 RNA5SP232-201ENST00000364144 119 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 RNA5SP140-201ENST00000364524 92 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 RNA5SP474-201ENST00000391234 90 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 RN7SKP86-201ENST00000410454 332 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 OFD1P11Y-201ENST00000418213 1177 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 GAPDHP49-201ENST00000421421 961 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC004074.1-201ENST00000421810 1063 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 GAPDHP57-201ENST00000424400 585 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 RPL23AP76-201ENST00000441860 458 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 MTND4P18-201ENST00000447010 465 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC079776.3-201ENST00000450665 370 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 TPMTP4-201ENST00000450749 678 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC097262.1-201ENST00000452559 548 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 GYG1P1-201ENST00000460864 698 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 MTCO3P7-201ENST00000510008 774 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 MTND5P13-201ENST00000513046 1079 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC110775.1-201ENST00000513721 462 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC105185.1-201ENST00000518705 535 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 UBE2NP1-201ENST00000545592 458 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 ISCA1P3-201ENST00000577104 373 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC090312.2-201ENST00000582687 378 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AP002360.4-201ENST00000606980 481 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AL451074.6-201ENST00000608512 729 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC004241.2-201ENST00000614562 444 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 SGO1P1-201ENST00000603525 1447 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 NF1P8-201ENST00000415351 1461 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 CD46-209ENST00000367047 3089 ntTSL 5 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 AC046144.1-201ENST00000478559 1853 ntBASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.41□□□□□ -1.22
NPAS4Q8IUM7 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 DDX18P4-201ENST00000511690 1966 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC093311.1-201ENST00000506586 2021 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 OR2AH1P-202ENST00000641232 2744 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 MAPK10-357ENST00000641831 2858 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 RNU6-553P-201ENST00000364047 96 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 RN7SKP47-201ENST00000365347 328 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms