Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.68□□□□□ -1.5
RPS3AP61247 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RPS3AP61247 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.68□□□□□ -1.5
RPS3AP61247 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.68□□□□□ -1.5
RPS3AP61247 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.68□□□□□ -1.5
RPS3AP61247 MAST4-IT1-201ENST00000514241 658 ntBASIC5.68□□□□□ -1.5
RPS3AP61247 MTCYBP19-201ENST00000517463 1124 ntBASIC5.68□□□□□ -1.5
RPS3AP61247 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.68□□□□□ -1.5
RPS3AP61247 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RPS3AP61247 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
RPS3AP61247 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.68□□□□□ -1.5
RPS3AP61247 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.68□□□□□ -1.5
RPS3AP61247 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.68□□□□□ -1.5
RPS3AP61247 AC002519.2-203ENST00000567043 837 ntBASIC5.68□□□□□ -1.5
RPS3AP61247 AC009852.2-201ENST00000567898 485 ntBASIC5.68□□□□□ -1.5
RPS3AP61247 MIR4271-201ENST00000582451 67 ntBASIC5.68□□□□□ -1.5
RPS3AP61247 AC005242.1-201ENST00000585658 438 ntBASIC5.68□□□□□ -1.5
RPS3AP61247 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.68□□□□□ -1.5
RPS3AP61247 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.68□□□□□ -1.5
RPS3AP61247 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RPS3AP61247 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.68□□□□□ -1.5
RPS3AP61247 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.68□□□□□ -1.5
RPS3AP61247 AC084373.1-201ENST00000603311 235 ntBASIC5.68□□□□□ -1.5
RPS3AP61247 RPSAP75-201ENST00000605848 301 ntBASIC5.68□□□□□ -1.5
RPS3AP61247 AL022394.1-201ENST00000606979 292 ntBASIC5.68□□□□□ -1.5
RPS3AP61247 AL451049.1-201ENST00000608672 497 ntBASIC5.68□□□□□ -1.5
RPS3AP61247 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.68□□□□□ -1.5
RPS3AP61247 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.68□□□□□ -1.5
RPS3AP61247 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPS3AP61247 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPS3AP61247 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RPS3AP61247 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RPS3AP61247 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RPS3AP61247 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RPS3AP61247 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.68□□□□□ -1.5
RPS3AP61247 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPS3AP61247 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RPS3AP61247 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.68□□□□□ -1.5
RPS3AP61247 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 RLIMP2-201ENST00000427891 1563 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AC097063.1-201ENST00000426714 1797 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RPS3AP61247 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
RPS3AP61247 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.67□□□□□ -1.5
RPS3AP61247 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.67□□□□□ -1.5
RPS3AP61247 AC007342.7-201ENST00000624610 2337 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 U3.10-201ENST00000364459 214 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.67□□□□□ -1.5
RPS3AP61247 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RPS3AP61247 AC104297.1-201ENST00000393779 870 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 YWHAZP6-201ENST00000399764 738 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 RNA5SP198-201ENST00000410376 127 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.67□□□□□ -1.5
RPS3AP61247 AC092865.3-201ENST00000425390 1026 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AC073508.1-201ENST00000428866 656 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.67□□□□□ -1.5
RPS3AP61247 AC099670.2-201ENST00000435130 321 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 MTND2P40-201ENST00000436718 841 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.67□□□□□ -1.5
RPS3AP61247 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.67□□□□□ -1.5
RPS3AP61247 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.67□□□□□ -1.5
RPS3AP61247 AL513321.1-201ENST00000441175 761 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AC015983.1-201ENST00000441577 373 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.67□□□□□ -1.5
RPS3AP61247 SUMO2P1-206ENST00000445436 284 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AL157827.1-201ENST00000447622 132 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 HMGB1P7-201ENST00000450921 612 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.67□□□□□ -1.5
RPS3AP61247 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.67□□□□□ -1.5
RPS3AP61247 AC021006.1-201ENST00000489849 553 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RPS3AP61247 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RPS3AP61247 OR4D12P-201ENST00000509361 911 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 BTG4P1-201ENST00000510421 183 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 FTH1P11-201ENST00000517577 551 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AP004609.2-201ENST00000532177 190 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
RPS3AP61247 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.67□□□□□ -1.5
RPS3AP61247 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.67□□□□□ -1.5
RPS3AP61247 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.67□□□□□ -1.5
RPS3AP61247 AL359219.2-201ENST00000555184 348 ntBASIC5.67□□□□□ -1.5
RPS3AP61247 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms