Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC083795.1-201ENST00000491760 320 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN20P56880 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.42□□□□□ -1.54
CLDN20P56880 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.42□□□□□ -1.54
CLDN20P56880 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CLDN20P56880 TRIM77BP-201ENST00000524985 1119 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 AP003049.1-201ENST00000529418 457 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN20P56880 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 CR383656.14-201ENST00000551951 406 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN20P56880 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN20P56880 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 AC090236.2-201ENST00000587933 1101 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 AC125494.2-201ENST00000602431 657 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN20P56880 MIR6809-201ENST00000612189 116 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN20P56880 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN20P56880 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN20P56880 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN20P56880 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.42□□□□□ -1.54
CLDN20P56880 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CLDN20P56880 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.42□□□□□ -1.54
CLDN20P56880 AC114774.1-201ENST00000507410 1770 ntBASIC5.42□□□□□ -1.54
CLDN20P56880 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN20P56880 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 RBPJP7-201ENST00000442803 1447 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 RBPJP5-201ENST00000449433 1447 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN20P56880 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CLDN20P56880 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CLDN20P56880 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 GNL2P1-201ENST00000451274 2190 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLDN20P56880 RNA5SP273-201ENST00000362484 113 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 AC007068.1-201ENST00000396690 844 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN20P56880 AL354890.1-201ENST00000413730 346 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 RPL35AP3-201ENST00000414680 288 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN20P56880 PTCD2P2-201ENST00000415579 1095 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.41□□□□□ -1.54
CLDN20P56880 GAPDHP75-201ENST00000433910 943 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.41□□□□□ -1.54
CLDN20P56880 HLA-DPA3-207ENST00000454398 229 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 RN7SL269P-201ENST00000467795 305 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 AC022336.1-201ENST00000475510 337 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 AC092865.4-201ENST00000477936 615 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 RN7SL193P-201ENST00000491708 276 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLDN20P56880 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN20P56880 AC006499.4-201ENST00000510947 694 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN20P56880 AC134349.2-201ENST00000535136 910 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CLDN20P56880 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.41□□□□□ -1.54
CLDN20P56880 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.41□□□□□ -1.54
CLDN20P56880 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN20P56880 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
CLDN20P56880 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.41□□□□□ -1.54
CLDN20P56880 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN20P56880 AC119403.2-201ENST00000590960 598 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN20P56880 AC108865.2-201ENST00000606881 432 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 AC144521.1-201ENST00000607148 956 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 AL158211.2-201ENST00000607282 395 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 AC135803.1-201ENST00000608748 565 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 uc_338.26-201ENST00000612659 160 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.41□□□□□ -1.54
CLDN20P56880 AP005435.3-201ENST00000531260 3198 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN20P56880 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CLDN20P56880 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CLDN20P56880 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 AF287957.1-201ENST00000607368 1595 ntBASIC5.41□□□□□ -1.54
CLDN20P56880 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
CLDN20P56880 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLDN20P56880 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
CLDN20P56880 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.41□□□□□ -1.54
CLDN20P56880 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN20P56880 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLDN20P56880 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms