Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CHGAP10645 NSRP1P1-201ENST00000444067 1693 ntBASIC10.44□□□□□ -0.74
CHGAP10645 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 PHACTR2P1-201ENST00000605639 1414 ntBASIC10.44□□□□□ -0.74
CHGAP10645 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CHGAP10645 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 MIR525-201ENST00000384978 85 ntBASIC10.44□□□□□ -0.74
CHGAP10645 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC10.44□□□□□ -0.74
CHGAP10645 AL603650.1-201ENST00000412680 240 ntBASIC10.44□□□□□ -0.74
CHGAP10645 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC10.44□□□□□ -0.74
CHGAP10645 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC10.44□□□□□ -0.74
CHGAP10645 AL050321.1-201ENST00000432363 400 ntBASIC10.44□□□□□ -0.74
CHGAP10645 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC10.44□□□□□ -0.74
CHGAP10645 PSPHP1-201ENST00000450062 261 ntBASIC10.44□□□□□ -0.74
CHGAP10645 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC10.44□□□□□ -0.74
CHGAP10645 AC040975.1-201ENST00000472104 316 ntBASIC10.44□□□□□ -0.74
CHGAP10645 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC10.44□□□□□ -0.74
CHGAP10645 AC109462.1-201ENST00000491087 368 ntBASIC10.44□□□□□ -0.74
CHGAP10645 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC10.44□□□□□ -0.74
CHGAP10645 MTND3P22-201ENST00000510932 243 ntBASIC10.44□□□□□ -0.74
CHGAP10645 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC10.44□□□□□ -0.74
CHGAP10645 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC10.44□□□□□ -0.74
CHGAP10645 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC10.44□□□□□ -0.74
CHGAP10645 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC10.44□□□□□ -0.74
CHGAP10645 AC121758.1-202ENST00000556917 658 ntBASIC10.44□□□□□ -0.74
CHGAP10645 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC10.44□□□□□ -0.74
CHGAP10645 AL138976.2-201ENST00000563989 694 ntBASIC10.44□□□□□ -0.74
CHGAP10645 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
CHGAP10645 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC10.44□□□□□ -0.74
CHGAP10645 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 AC036176.3-201ENST00000602456 418 ntBASIC10.44□□□□□ -0.74
CHGAP10645 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC10.44□□□□□ -0.74
CHGAP10645 AP000894.4-201ENST00000610185 483 ntBASIC10.44□□□□□ -0.74
CHGAP10645 AC091834.1-201ENST00000614543 472 ntBASIC10.44□□□□□ -0.74
CHGAP10645 MESTIT1_2.1-201ENST00000616328 235 ntBASIC10.44□□□□□ -0.74
CHGAP10645 AC018816.2-201ENST00000621460 353 ntBASIC10.44□□□□□ -0.74
CHGAP10645 MTHFD1P1-201ENST00000413059 2764 ntBASIC10.44□□□□□ -0.74
CHGAP10645 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC10.44□□□□□ -0.74
CHGAP10645 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC10.44□□□□□ -0.74
CHGAP10645 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CHGAP10645 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CHGAP10645 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CHGAP10645 SPATA2P1-201ENST00000431223 2055 ntBASIC10.43□□□□□ -0.74
CHGAP10645 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC10.43□□□□□ -0.74
CHGAP10645 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC10.43□□□□□ -0.74
CHGAP10645 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CHGAP10645 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CHGAP10645 ESD-201ENST00000378697 1079 ntTSL 5 BASIC10.43□□□□□ -0.74
CHGAP10645 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CHGAP10645 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
CHGAP10645 RN7SKP146-201ENST00000410242 334 ntBASIC10.43□□□□□ -0.74
CHGAP10645 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC10.43□□□□□ -0.74
CHGAP10645 BTF3P10-201ENST00000433415 495 ntBASIC10.43□□□□□ -0.74
CHGAP10645 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC10.43□□□□□ -0.74
CHGAP10645 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC10.43□□□□□ -0.74
CHGAP10645 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC10.43□□□□□ -0.74
CHGAP10645 AC108120.1-201ENST00000506543 991 ntBASIC10.43□□□□□ -0.74
CHGAP10645 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC10.43□□□□□ -0.74
CHGAP10645 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC10.43□□□□□ -0.74
CHGAP10645 AC138649.3-201ENST00000622154 254 ntBASIC10.43□□□□□ -0.74
CHGAP10645 FER-210ENST00000628534 558 ntTSL 5 BASIC10.43□□□□□ -0.74
CHGAP10645 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC10.43□□□□□ -0.74
CHGAP10645 CLUHP10-201ENST00000631979 980 ntBASIC10.43□□□□□ -0.74
CHGAP10645 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC10.43□□□□□ -0.74
CHGAP10645 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CHGAP10645 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CHGAP10645 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC10.43□□□□□ -0.74
CHGAP10645 AC138207.6-201ENST00000579164 1967 ntBASIC10.43□□□□□ -0.74
CHGAP10645 AL590763.1-201ENST00000398297 1545 ntBASIC10.43□□□□□ -0.74
CHGAP10645 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CHGAP10645 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CHGAP10645 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
CHGAP10645 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CHGAP10645 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CHGAP10645 LUCAT1-203ENST00000513626 2672 ntTSL 2 BASIC10.42□□□□□ -0.74
CHGAP10645 AC245505.2-201ENST00000553572 3055 ntBASIC10.42□□□□□ -0.74
CHGAP10645 AL157700.1-201ENST00000561973 1432 ntBASIC10.42□□□□□ -0.74
CHGAP10645 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC10.42□□□□□ -0.74
CHGAP10645 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
CHGAP10645 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC10.42□□□□□ -0.74
CHGAP10645 AC092646.2-201ENST00000431242 2095 ntBASIC10.42□□□□□ -0.74
CHGAP10645 CDY11P-201ENST00000447168 1651 ntBASIC10.42□□□□□ -0.74
CHGAP10645 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
CHGAP10645 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
CHGAP10645 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CHGAP10645 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CHGAP10645 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CHGAP10645 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC10.42□□□□□ -0.74
CHGAP10645 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC10.42□□□□□ -0.74
CHGAP10645 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC10.42□□□□□ -0.74
CHGAP10645 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms