Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX3O60493 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX3O60493 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
SNX3O60493 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX3O60493 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
SNX3O60493 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.48□□□□□ -1.53
SNX3O60493 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX3O60493 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 RN7SKP117-201ENST00000410175 264 ntBASIC5.48□□□□□ -1.53
SNX3O60493 RN7SKP108-201ENST00000411367 328 ntBASIC5.48□□□□□ -1.53
SNX3O60493 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.48□□□□□ -1.53
SNX3O60493 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.48□□□□□ -1.53
SNX3O60493 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX3O60493 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.48□□□□□ -1.53
SNX3O60493 NPM1P23-201ENST00000440193 849 ntBASIC5.48□□□□□ -1.53
SNX3O60493 AL929410.2-201ENST00000451170 189 ntBASIC5.48□□□□□ -1.53
SNX3O60493 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX3O60493 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX3O60493 NPM1P21-201ENST00000513394 762 ntBASIC5.48□□□□□ -1.53
SNX3O60493 SETP21-201ENST00000514799 892 ntBASIC5.48□□□□□ -1.53
SNX3O60493 SCARNA20.4-201ENST00000516969 131 ntBASIC5.48□□□□□ -1.53
SNX3O60493 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX3O60493 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.48□□□□□ -1.53
SNX3O60493 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.48□□□□□ -1.53
SNX3O60493 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.48□□□□□ -1.53
SNX3O60493 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.48□□□□□ -1.53
SNX3O60493 AL080312.2-201ENST00000613001 630 ntBASIC5.48□□□□□ -1.53
SNX3O60493 AL512652.1-201ENST00000619006 500 ntBASIC5.48□□□□□ -1.53
SNX3O60493 MIR6829-201ENST00000620375 67 ntBASIC5.48□□□□□ -1.53
SNX3O60493 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
SNX3O60493 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SNX3O60493 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.48□□□□□ -1.53
SNX3O60493 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SNX3O60493 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.48□□□□□ -1.53
SNX3O60493 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SNX3O60493 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SNX3O60493 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX3O60493 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 AC104260.2-201ENST00000623551 3497 ntBASIC5.47□□□□□ -1.53
SNX3O60493 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 AC016739.1-201ENST00000405359 345 ntBASIC5.47□□□□□ -1.53
SNX3O60493 AL357752.1-201ENST00000412817 349 ntBASIC5.47□□□□□ -1.53
SNX3O60493 RPSAP35-201ENST00000413753 818 ntBASIC5.47□□□□□ -1.53
SNX3O60493 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX3O60493 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX3O60493 REREP1Y-201ENST00000422655 198 ntBASIC5.47□□□□□ -1.53
SNX3O60493 NANOGP4-201ENST00000427230 913 ntBASIC5.47□□□□□ -1.53
SNX3O60493 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX3O60493 REREP2Y-201ENST00000439103 200 ntBASIC5.47□□□□□ -1.53
SNX3O60493 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX3O60493 NDUFA5P8-201ENST00000449019 346 ntBASIC5.47□□□□□ -1.53
SNX3O60493 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.47□□□□□ -1.53
SNX3O60493 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 RPL12P30-201ENST00000488389 499 ntBASIC5.47□□□□□ -1.53
SNX3O60493 AC073610.1-201ENST00000489971 396 ntBASIC5.47□□□□□ -1.53
SNX3O60493 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
SNX3O60493 RPS26P24-201ENST00000497656 331 ntBASIC5.47□□□□□ -1.53
SNX3O60493 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.47□□□□□ -1.53
SNX3O60493 AC138409.2-202ENST00000507274 458 ntBASIC5.47□□□□□ -1.53
SNX3O60493 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX3O60493 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX3O60493 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX3O60493 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.47□□□□□ -1.53
SNX3O60493 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.47□□□□□ -1.53
SNX3O60493 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX3O60493 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX3O60493 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX3O60493 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX3O60493 AC091304.5-201ENST00000568969 158 ntBASIC5.47□□□□□ -1.53
SNX3O60493 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.47□□□□□ -1.53
SNX3O60493 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX3O60493 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX3O60493 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.47□□□□□ -1.53
SNX3O60493 BX322635.1-201ENST00000605804 496 ntBASIC5.47□□□□□ -1.53
SNX3O60493 MIR6736-201ENST00000616799 59 ntBASIC5.47□□□□□ -1.53
SNX3O60493 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SNX3O60493 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX3O60493 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX3O60493 AC073869.10-201ENST00000642016 354 ntBASIC5.47□□□□□ -1.53
SNX3O60493 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms