Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 VDAC2P2-201ENST00000544463 901 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 AC026464.5-201ENST00000562497 722 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 AL021878.2-201ENST00000602718 399 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 AL390058.1-201ENST00000603834 629 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 AC243773.3-201ENST00000613270 256 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 CU638689.2-201ENST00000623809 818 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 NF1P1-201ENST00000604105 2645 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 OR51E1-202ENST00000530215 2942 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 RIOK3P1-201ENST00000418778 1528 ntBASIC7.57□□□□□ -1.2
USB1Q9BQ65 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 TAOK3-209ENST00000537952 2147 ntTSL 2 BASIC7.57□□□□□ -1.2
USB1Q9BQ65 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 FAM13C-217ENST00000618804 3333 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
USB1Q9BQ65 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 UGT2B27P-201ENST00000505092 1620 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 ZEB2-215ENST00000465070 2949 ntTSL 2 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 PTPRR-203ENST00000378778 2632 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC132825.4-201ENST00000582527 3644 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 EML5-201ENST00000380664 5910 ntTSL 5 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 FO393411.1-201ENST00000325612 420 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 SNRPEP3-201ENST00000338402 276 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 SNORD116-29-201ENST00000384516 83 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 FTH1P3-201ENST00000394290 584 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 ARF1P1-201ENST00000406466 544 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 RPL7L1P12-201ENST00000417594 729 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 IGKV1OR9-1-201ENST00000424370 284 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 PYHIN5P-201ENST00000431627 723 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC016489.1-201ENST00000461109 375 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 HMGN2P26-201ENST00000463169 339 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC025062.1-201ENST00000465163 644 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC108693.1-201ENST00000496068 432 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 IGKV2D-18-201ENST00000519785 375 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AP003122.3-201ENST00000526316 255 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 GTF2IP11-201ENST00000526931 420 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AL591767.2-201ENST00000554984 173 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC099489.2-201ENST00000574976 260 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 PPIAP14-201ENST00000577627 496 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC087393.3-201ENST00000584971 166 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC020908.1-201ENST00000598893 280 ntTSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 STX8P1-201ENST00000603161 355 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 RFPL4AP6-201ENST00000616792 846 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC011297.1-201ENST00000620503 2110 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 MIR6754-201ENST00000621121 66 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 AQP4-208ENST00000622234 891 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 TEX46-203ENST00000622840 479 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 OR7A2P-202ENST00000641312 1219 ntBASIC7.56□□□□□ -1.2
USB1Q9BQ65 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.56□□□□□ -1.2
USB1Q9BQ65 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
USB1Q9BQ65 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms