Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
ALDH1A1P00352 AC013268.3-201ENST00000262716 2324 ntBASIC8.29□□□□□ -1.08
ALDH1A1P00352 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
ALDH1A1P00352 MELK-208ENST00000536987 2125 ntTSL 2 BASIC8.29□□□□□ -1.08
ALDH1A1P00352 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
ALDH1A1P00352 FANCD2P2-201ENST00000437591 1400 ntBASIC8.29□□□□□ -1.08
ALDH1A1P00352 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
ALDH1A1P00352 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 LRRC37A11P-202ENST00000579258 3717 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 RPL5P5-201ENST00000392009 893 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 TPT1P2-201ENST00000413105 503 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 PLA2G12AP2-201ENST00000424744 264 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 RPL21P43-201ENST00000425440 472 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC007365.2-201ENST00000428806 458 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 AL035458.1-201ENST00000433096 585 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 ATP5F1P1-201ENST00000433775 569 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 Z80107.2-201ENST00000445127 392 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 RPS3AP49-201ENST00000472161 790 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC096743.1-201ENST00000485172 319 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC087477.6-201ENST00000559595 843 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC090515.3-201ENST00000560431 315 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC012146.2-201ENST00000576545 416 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC007448.1-201ENST00000582714 234 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC106028.5-201ENST00000610332 395 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 AL121809.2-201ENST00000613169 341 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 AL121936.2-201ENST00000641935 662 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 AC106872.5-201ENST00000508856 1416 ntBASIC8.28□□□□□ -1.08
ALDH1A1P00352 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC8.28□□□□□ -1.08
ALDH1A1P00352 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
ALDH1A1P00352 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
ALDH1A1P00352 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.27□□□□□ -1.08
ALDH1A1P00352 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
ALDH1A1P00352 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ALDH1A1P00352 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ALDH1A1P00352 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ALDH1A1P00352 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ALDH1A1P00352 CD46-209ENST00000367047 3089 ntTSL 5 BASIC8.27□□□□□ -1.09
ALDH1A1P00352 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
ALDH1A1P00352 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
ALDH1A1P00352 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
ALDH1A1P00352 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.27□□□□□ -1.09
ALDH1A1P00352 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ALDH1A1P00352 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
ALDH1A1P00352 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
ALDH1A1P00352 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
ALDH1A1P00352 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
ALDH1A1P00352 RNA5SP188-201ENST00000362916 129 ntBASIC8.27□□□□□ -1.09
ALDH1A1P00352 RNU6-839P-201ENST00000363347 108 ntBASIC8.27□□□□□ -1.09
ALDH1A1P00352 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.27□□□□□ -1.09
ALDH1A1P00352 AL391419.1-201ENST00000398901 1275 ntBASIC8.27□□□□□ -1.09
ALDH1A1P00352 MIR1272-201ENST00000408106 129 ntBASIC8.27□□□□□ -1.09
ALDH1A1P00352 RNU2-17P-201ENST00000410290 190 ntBASIC8.27□□□□□ -1.09
ALDH1A1P00352 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC8.27□□□□□ -1.09
ALDH1A1P00352 ZYG11AP1-201ENST00000430329 837 ntBASIC8.27□□□□□ -1.09
ALDH1A1P00352 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.27□□□□□ -1.09
ALDH1A1P00352 AC069154.1-201ENST00000432914 542 ntBASIC8.27□□□□□ -1.09
ALDH1A1P00352 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.27□□□□□ -1.09
ALDH1A1P00352 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.27□□□□□ -1.09
ALDH1A1P00352 MTND4LP10-201ENST00000435146 291 ntBASIC8.27□□□□□ -1.09
ALDH1A1P00352 MYL6P3-201ENST00000436904 432 ntBASIC8.27□□□□□ -1.09
ALDH1A1P00352 RPS27AP2-201ENST00000457576 465 ntBASIC8.27□□□□□ -1.09
ALDH1A1P00352 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC8.27□□□□□ -1.09
ALDH1A1P00352 AC072039.1-201ENST00000477611 581 ntBASIC8.27□□□□□ -1.09
ALDH1A1P00352 RPS27P20-201ENST00000492051 246 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms