Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC095052.1-201ENST00000509955 863 ntBASIC5.41□□□□□ -1.54
SSX4O60224 RN7SKP35-201ENST00000517210 151 ntBASIC5.41□□□□□ -1.54
SSX4O60224 IGLVIV-64-201ENST00000518581 301 ntBASIC5.41□□□□□ -1.54
SSX4O60224 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX4O60224 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX4O60224 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX4O60224 OR8K2P-201ENST00000524645 927 ntBASIC5.41□□□□□ -1.54
SSX4O60224 OR4V1P-201ENST00000525394 1140 ntBASIC5.41□□□□□ -1.54
SSX4O60224 AC027369.2-201ENST00000528030 440 ntBASIC5.41□□□□□ -1.54
SSX4O60224 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.41□□□□□ -1.54
SSX4O60224 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.41□□□□□ -1.54
SSX4O60224 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.41□□□□□ -1.54
SSX4O60224 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX4O60224 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.41□□□□□ -1.54
SSX4O60224 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.41□□□□□ -1.54
SSX4O60224 MIR6729-201ENST00000618194 65 ntBASIC5.41□□□□□ -1.54
SSX4O60224 AC074276.2-201ENST00000619891 348 ntBASIC5.41□□□□□ -1.54
SSX4O60224 AC026124.2-201ENST00000621847 656 ntBASIC5.41□□□□□ -1.54
SSX4O60224 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.41□□□□□ -1.54
SSX4O60224 MTCO1P28-201ENST00000574177 1528 ntBASIC5.41□□□□□ -1.54
SSX4O60224 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SSX4O60224 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SSX4O60224 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SSX4O60224 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SSX4O60224 AL136984.1-201ENST00000607611 1893 ntBASIC5.41□□□□□ -1.54
SSX4O60224 SAGE3P-201ENST00000619800 1635 ntBASIC5.41□□□□□ -1.54
SSX4O60224 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
SSX4O60224 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSX4O60224 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSX4O60224 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SSX4O60224 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SSX4O60224 AL353743.3-201ENST00000442109 1468 ntBASIC5.4□□□□□ -1.54
SSX4O60224 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
SSX4O60224 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSX4O60224 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SSX4O60224 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX4O60224 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX4O60224 SNORD16-201ENST00000362803 99 ntBASIC5.4□□□□□ -1.54
SSX4O60224 SNORD1C-201ENST00000363315 78 ntBASIC5.4□□□□□ -1.54
SSX4O60224 RN7SKP78-201ENST00000364711 318 ntBASIC5.4□□□□□ -1.54
SSX4O60224 MIR421-201ENST00000365696 85 ntBASIC5.4□□□□□ -1.54
SSX4O60224 ST13P16-201ENST00000401760 781 ntBASIC5.4□□□□□ -1.54
SSX4O60224 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX4O60224 VTI1BP4-201ENST00000427516 527 ntBASIC5.4□□□□□ -1.54
SSX4O60224 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSX4O60224 RPS29P14-201ENST00000431518 171 ntBASIC5.4□□□□□ -1.54
SSX4O60224 MTND4LP7-201ENST00000431728 294 ntBASIC5.4□□□□□ -1.54
SSX4O60224 MED28P4-201ENST00000433137 572 ntBASIC5.4□□□□□ -1.54
SSX4O60224 PNKDP1-201ENST00000435914 430 ntBASIC5.4□□□□□ -1.54
SSX4O60224 MTND4P15-201ENST00000437913 1033 ntBASIC5.4□□□□□ -1.54
SSX4O60224 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX4O60224 PPIAP20-201ENST00000449839 135 ntBASIC5.4□□□□□ -1.54
SSX4O60224 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX4O60224 NPM1P28-201ENST00000492269 840 ntBASIC5.4□□□□□ -1.54
SSX4O60224 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX4O60224 AC104109.1-201ENST00000498563 436 ntBASIC5.4□□□□□ -1.54
SSX4O60224 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX4O60224 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX4O60224 TOMM22P4-201ENST00000511318 336 ntBASIC5.4□□□□□ -1.54
SSX4O60224 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX4O60224 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.4□□□□□ -1.54
SSX4O60224 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX4O60224 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.4□□□□□ -1.54
SSX4O60224 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX4O60224 CYCSP38-201ENST00000559840 322 ntBASIC5.4□□□□□ -1.54
SSX4O60224 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX4O60224 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX4O60224 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX4O60224 AC092474.3-201ENST00000603022 568 ntBASIC5.4□□□□□ -1.54
SSX4O60224 MIR6862-1-201ENST00000613016 70 ntBASIC5.4□□□□□ -1.54
SSX4O60224 MIR6862-2-201ENST00000614755 70 ntBASIC5.4□□□□□ -1.54
SSX4O60224 FAM27E2-201ENST00000619668 403 ntBASIC5.4□□□□□ -1.54
SSX4O60224 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX4O60224 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX4O60224 OR7E91P-202ENST00000642062 1198 ntBASIC5.4□□□□□ -1.54
SSX4O60224 CASC19-238ENST00000641523 1558 ntBASIC5.4□□□□□ -1.55
SSX4O60224 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SSX4O60224 HSPD1P9-201ENST00000420325 1636 ntBASIC5.4□□□□□ -1.55
SSX4O60224 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSX4O60224 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSX4O60224 AC003985.2-201ENST00000562268 1669 ntBASIC5.4□□□□□ -1.55
SSX4O60224 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SSX4O60224 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SSX4O60224 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.55
SSX4O60224 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX4O60224 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX4O60224 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SSX4O60224 AL031595.2-201ENST00000624215 19071 ntBASIC5.39□□□□□ -1.55
SSX4O60224 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX4O60224 RNU4-39P-201ENST00000362455 127 ntBASIC5.39□□□□□ -1.55
SSX4O60224 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX4O60224 RPL23AP85-201ENST00000421838 433 ntBASIC5.39□□□□□ -1.55
SSX4O60224 SETP10-201ENST00000424368 814 ntBASIC5.39□□□□□ -1.55
SSX4O60224 AC112492.2-201ENST00000432774 1030 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms