Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.89□□□□□ -1.47
CLDN5O00501 AC012616.1-201ENST00000600294 197 ntBASIC5.89□□□□□ -1.47
CLDN5O00501 AP001267.4-201ENST00000602598 545 ntBASIC5.89□□□□□ -1.47
CLDN5O00501 AC018690.1-201ENST00000608144 626 ntBASIC5.89□□□□□ -1.47
CLDN5O00501 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN5O00501 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CLDN5O00501 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN5O00501 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.89□□□□□ -1.47
CLDN5O00501 CASC19-248ENST00000641674 1356 ntBASIC5.89□□□□□ -1.47
CLDN5O00501 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CLDN5O00501 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CLDN5O00501 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN5O00501 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CLDN5O00501 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CLDN5O00501 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CLDN5O00501 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
CLDN5O00501 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
CLDN5O00501 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN5O00501 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN5O00501 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CLDN5O00501 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN5O00501 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CLDN5O00501 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN5O00501 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN5O00501 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN5O00501 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN5O00501 U3.10-201ENST00000364459 214 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN5O00501 RN7SKP59-201ENST00000410520 314 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN5O00501 AC013410.1-201ENST00000436223 1232 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN5O00501 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN5O00501 AC100832.1-201ENST00000471945 383 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 AC090638.1-201ENST00000498296 909 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN5O00501 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN5O00501 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.88□□□□□ -1.47
CLDN5O00501 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 AC093524.1-201ENST00000564266 1094 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN5O00501 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN5O00501 AC010245.2-201ENST00000606908 1167 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 AP000894.4-201ENST00000610185 483 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN5O00501 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CLDN5O00501 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.88□□□□□ -1.47
CLDN5O00501 MT-RNR2-201ENST00000387347 1559 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CLDN5O00501 UGT2B24P-201ENST00000514441 1597 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 AL034546.1-201ENST00000623740 3693 ntBASIC5.88□□□□□ -1.47
CLDN5O00501 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CLDN5O00501 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CLDN5O00501 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.88□□□□□ -1.47
CLDN5O00501 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN5O00501 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CLDN5O00501 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN5O00501 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN5O00501 AC138907.8-201ENST00000623981 2256 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN5O00501 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
CLDN5O00501 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.87□□□□□ -1.47
CLDN5O00501 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN5O00501 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN5O00501 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN5O00501 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN5O00501 RNA5SP319-201ENST00000362768 119 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 RN7SKP162-201ENST00000363605 345 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 RN7SKP6-201ENST00000364795 319 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 RNU4-2-201ENST00000365668 141 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CLDN5O00501 MIR143-201ENST00000385300 106 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 RPL35AP24-201ENST00000413846 330 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN5O00501 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.87□□□□□ -1.47
CLDN5O00501 SIAH1P1-201ENST00000479411 923 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 UBA52P7-201ENST00000486088 380 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 AC108693.1-201ENST00000496068 432 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CLDN5O00501 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN5O00501 PMS2P3-207ENST00000529061 717 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN5O00501 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN5O00501 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN5O00501 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CLDN5O00501 AP005403.1-201ENST00000579720 229 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN5O00501 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.87□□□□□ -1.47
CLDN5O00501 SUGT1P3-202ENST00000604259 383 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 AP000864.1-201ENST00000609424 650 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.87□□□□□ -1.47
CLDN5O00501 AC005840.5-201ENST00000619166 599 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 MIR8080-201ENST00000622224 89 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.87□□□□□ -1.47
CLDN5O00501 AC130360.2-201ENST00000533477 1556 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 AC093829.1-201ENST00000506662 1618 ntBASIC5.87□□□□□ -1.47
CLDN5O00501 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.87□□□□□ -1.47
CLDN5O00501 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CLDN5O00501 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms