Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 RNU6-878P-201ENST00000384578 110 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 FANCL-204ENST00000403676 849 ntTSL 3 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AL353692.1-201ENST00000405081 755 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 TUBB4BP7-201ENST00000406999 1234 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 RNU6-195P-201ENST00000411352 109 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 EIF3KP2-201ENST00000415266 626 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC009302.1-201ENST00000417147 390 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC092100.1-203ENST00000421513 653 ntTSL 3 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AKR1B10P1-201ENST00000425765 942 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 TRIM26BP-206ENST00000427723 753 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 RPL31P35-201ENST00000431058 377 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 MTCO2P11-201ENST00000431069 680 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 RPL7L1P11-201ENST00000446092 721 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AL596266.1-201ENST00000448132 400 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AL445466.1-201ENST00000448432 357 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC239809.1-201ENST00000450470 217 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 RPL29P23-201ENST00000486188 442 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC011005.3-201ENST00000491624 395 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 ACTBP6-201ENST00000520036 1090 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 ATM-209ENST00000526567 560 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AK6P1-201ENST00000540219 478 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 CYP4A44P-201ENST00000569984 154 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 MIR3911-201ENST00000577791 109 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC008687.3-201ENST00000599209 598 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 SDCBP2-AS1-202ENST00000607947 808 ntTSL 3 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC104260.1-201ENST00000616660 539 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 MIR6744-201ENST00000619480 66 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AL512638.3-201ENST00000620370 298 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC009268.2-201ENST00000621925 457 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC139792.3-201ENST00000623525 224 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC099654.6-201ENST00000636487 512 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 EFCAB5-208ENST00000536908 2826 ntTSL 2 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AL136146.1-201ENST00000529830 1667 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 CCDC65-201ENST00000266984 2084 ntTSL 5 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AL022163.1-201ENST00000430261 1569 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 AC024560.2-201ENST00000507981 1497 ntBASIC9.79□□□□□ -0.84
RTN4Q9NQC3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RTN4Q9NQC3 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 PLCE1-AS2-202ENST00000432782 1612 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC124017.1-202ENST00000506950 1616 ntTSL 2 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 RNU4-2-201ENST00000365668 141 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 IGHV1-46-201ENST00000390622 655 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 RNU6-1009P-201ENST00000390996 107 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC079834.1-201ENST00000414016 421 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 MRPS18BP1-201ENST00000414228 192 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC099336.2-201ENST00000422457 254 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 TRIM60P3Y-201ENST00000432201 673 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC092803.1-201ENST00000439570 359 ntTSL 3 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC090954.1-201ENST00000445502 361 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC114755.5-201ENST00000447760 831 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 CEACAMP5-201ENST00000448037 961 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 IGHV3-64-201ENST00000454421 431 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 MTND1P11-201ENST00000456661 876 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC099560.2-201ENST00000457554 255 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 EIF3LP3-201ENST00000495197 822 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 MTCYBP18-201ENST00000501056 747 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC146949.1-201ENST00000505946 423 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC146944.1-201ENST00000508439 418 ntBASIC9.78□□□□□ -0.84
RTN4Q9NQC3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC9.78□□□□□ -0.84
RTN4Q9NQC3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms