Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC012507.3-201ENST00000603556 477 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC090948.2-201ENST00000607363 564 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 LINC02028-221ENST00000622169 621 ntTSL 5 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC091925.1-201ENST00000623204 462 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 AC005609.2-201ENST00000623320 592 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 AL132796.3-201ENST00000624703 900 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 ZMAT4-201ENST00000297737 2466 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 THAP12P6-201ENST00000431978 2310 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 LYARP1-201ENST00000436977 1501 ntBASIC8.48□□□□□ -1.05
LRCH3Q96II8 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 ZNF136-201ENST00000343979 3643 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC8.48□□□□□ -1.05
LRCH3Q96II8 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
LRCH3Q96II8 DCAF4-212ENST00000553457 2896 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 FAM13C-215ENST00000614220 3388 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC100871.1-201ENST00000507871 1456 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 AL136140.2-201ENST00000624717 1705 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 Y_RNA.157-201ENST00000363638 102 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 RNU6-185P-201ENST00000384421 107 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 SNORD65-201ENST00000391079 73 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 AL139128.1-201ENST00000413921 941 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 CYP4F34P-201ENST00000425951 481 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 MYO5BP3-201ENST00000431872 1279 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 PGBD4P3-201ENST00000440731 581 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC005517.1-201ENST00000452091 489 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 RNU6-420P-201ENST00000458780 107 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC073594.1-201ENST00000462065 364 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 CYP4F27P-201ENST00000514557 494 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC069240.2-201ENST00000550242 609 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 AL391646.1-201ENST00000603860 190 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC108451.2-201ENST00000603875 538 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC090948.1-201ENST00000607464 549 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 AC245407.2-201ENST00000614199 451 ntBASIC8.47□□□□□ -1.05
LRCH3Q96II8 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
LRCH3Q96II8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
LRCH3Q96II8 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
LRCH3Q96II8 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
LRCH3Q96II8 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
LRCH3Q96II8 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LRCH3Q96II8 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC8.46□□□□□ -1.05
LRCH3Q96II8 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.46□□□□□ -1.05
LRCH3Q96II8 AL590004.4-201ENST00000566733 7060 ntBASIC8.46□□□□□ -1.05
LRCH3Q96II8 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LRCH3Q96II8 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LRCH3Q96II8 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
LRCH3Q96II8 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC8.46□□□□□ -1.05
LRCH3Q96II8 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LRCH3Q96II8 VEZF1P1-201ENST00000423931 1541 ntBASIC8.46□□□□□ -1.05
LRCH3Q96II8 AL031123.3-201ENST00000623345 1837 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms