Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL513327.3-201ENST00000602618 469 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 AC009831.5-201ENST00000624000 3189 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 AC005618.1-201ENST00000606901 3148 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC3.3□□□□□ -1.88
HSPG2P98160 AC009948.3-201ENST00000603415 1798 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 KARSP3-201ENST00000571212 1504 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 AC007161.1-204ENST00000423039 460 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AL590399.4-201ENST00000436561 601 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 SLC25A51P1-201ENST00000468432 871 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 RPL12P20-201ENST00000475538 479 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 CSNK1A1P3-201ENST00000504105 330 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC3.3□□□□□ -1.88
HSPG2P98160 RNA5SP43-201ENST00000516559 110 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.3□□□□□ -1.88
HSPG2P98160 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC3.3□□□□□ -1.88
HSPG2P98160 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC3.3□□□□□ -1.88
HSPG2P98160 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 AC131649.2-201ENST00000624925 4439 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 PABPC1P8-201ENST00000452851 2086 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC3.3□□□□□ -1.88
HSPG2P98160 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 CHEK2P3-201ENST00000416118 248 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC3.3□□□□□ -1.88
HSPG2P98160 AC023424.1-201ENST00000496058 459 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AC020593.1-201ENST00000507399 299 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AC026726.1-201ENST00000512859 601 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC3.3□□□□□ -1.88
HSPG2P98160 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.3□□□□□ -1.88
HSPG2P98160 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.3□□□□□ -1.88
HSPG2P98160 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC3.3□□□□□ -1.88
HSPG2P98160 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.3□□□□□ -1.88
HSPG2P98160 OR4H6P-201ENST00000563771 921 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 PDCD6IPP2-207ENST00000566321 1069 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HSPG2P98160 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.3□□□□□ -1.88
HSPG2P98160 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HSPG2P98160 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC3.29□□□□□ -1.88
HSPG2P98160 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC3.29□□□□□ -1.88
HSPG2P98160 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HSPG2P98160 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HSPG2P98160 CDY5P-201ENST00000411487 1580 ntBASIC3.29□□□□□ -1.88
HSPG2P98160 CDY9P-201ENST00000451397 1580 ntBASIC3.29□□□□□ -1.88
HSPG2P98160 RNA5SP191-201ENST00000362585 102 ntBASIC3.29□□□□□ -1.88
HSPG2P98160 GSTM5P1-201ENST00000434751 660 ntBASIC3.29□□□□□ -1.88
HSPG2P98160 OR52A4P-201ENST00000472867 958 ntBASIC3.29□□□□□ -1.88
HSPG2P98160 TOMM22P4-201ENST00000511318 336 ntBASIC3.29□□□□□ -1.88
HSPG2P98160 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC3.29□□□□□ -1.88
HSPG2P98160 IGKV1-32-201ENST00000519290 311 ntBASIC3.29□□□□□ -1.88
HSPG2P98160 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC3.29□□□□□ -1.88
HSPG2P98160 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HSPG2P98160 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC3.29□□□□□ -1.88
HSPG2P98160 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HSPG2P98160 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC3.29□□□□□ -1.88
HSPG2P98160 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HSPG2P98160 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HSPG2P98160 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HSPG2P98160 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HSPG2P98160 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC3.29□□□□□ -1.88
HSPG2P98160 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.29□□□□□ -1.88
HSPG2P98160 SNORA59A-201ENST00000459326 152 ntBASIC3.29□□□□□ -1.88
HSPG2P98160 NIP7P2-201ENST00000485801 544 ntBASIC3.29□□□□□ -1.88
HSPG2P98160 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.29□□□□□ -1.88
HSPG2P98160 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.29□□□□□ -1.88
HSPG2P98160 RNA5SP464-201ENST00000516251 108 ntBASIC3.29□□□□□ -1.88
HSPG2P98160 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC3.29□□□□□ -1.88
HSPG2P98160 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.29□□□□□ -1.88
HSPG2P98160 AC009643.1-201ENST00000532030 391 ntBASIC3.29□□□□□ -1.88
HSPG2P98160 AC069366.1-201ENST00000583159 838 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms