Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNA5SP474-201ENST00000391234 90 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC104297.1-201ENST00000393779 870 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 MTCO2P31-201ENST00000402702 684 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AL021331.1-201ENST00000402817 582 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 RPL7P58-201ENST00000402913 758 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 RN7SKP97-201ENST00000410966 333 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX6-1P78426 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX6-1P78426 GAPDHP57-201ENST00000424400 585 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC115283.1-201ENST00000427353 400 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AL590128.1-201ENST00000433407 286 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AL645939.3-201ENST00000435408 225 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 MTCO2P20-201ENST00000437339 673 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX6-1P78426 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX6-1P78426 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX6-1P78426 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX6-1P78426 AL157777.1-201ENST00000468100 304 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 RN7SL216P-201ENST00000471607 298 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC068522.1-201ENST00000482895 345 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC093534.1-201ENST00000504977 132 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
NKX6-1P78426 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX6-1P78426 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX6-1P78426 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX6-1P78426 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX6-1P78426 AC084121.1-201ENST00000533882 835 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX6-1P78426 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX6-1P78426 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NKX6-1P78426 AC140063.1-201ENST00000541343 259 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
NKX6-1P78426 AL591767.3-201ENST00000554632 525 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX6-1P78426 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX6-1P78426 SNORA70D-201ENST00000578836 135 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 SS18L2P2-201ENST00000583960 235 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX6-1P78426 DYNLL1P1-201ENST00000595442 269 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC245036.5-201ENST00000596330 847 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.86□□□□□ -1.47
NKX6-1P78426 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX6-1P78426 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX6-1P78426 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.86□□□□□ -1.47
NKX6-1P78426 AC090897.3-201ENST00000636973 1157 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 MAPK10-344ENST00000641718 3746 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.86□□□□□ -1.47
NKX6-1P78426 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
NKX6-1P78426 IMMTP1-201ENST00000435590 2219 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 AC007159.1-201ENST00000566529 4706 ntBASIC5.86□□□□□ -1.47
NKX6-1P78426 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
NKX6-1P78426 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NKX6-1P78426 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NKX6-1P78426 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 RNA5SP188-201ENST00000362916 129 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 RNU4-68P-201ENST00000364314 141 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 SNORA70.3-201ENST00000365075 132 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.85□□□□□ -1.47
NKX6-1P78426 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 RNU6-729P-201ENST00000384399 107 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NKX6-1P78426 UBBP1-201ENST00000392399 473 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 PSMA6P1-201ENST00000400275 741 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 VIM2P-201ENST00000402383 1294 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 SNORA11B-201ENST00000408175 129 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 RNU4ATAC2P-201ENST00000408674 126 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 AC005005.2-201ENST00000420779 380 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 DUTP4-201ENST00000424782 475 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 DPY19L1P2-201ENST00000426647 915 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 PTGES3P1-201ENST00000439531 483 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 AC092170.1-201ENST00000440211 356 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 AL353093.1-201ENST00000441292 436 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 GAPDHP20-201ENST00000444107 1007 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.85□□□□□ -1.47
NKX6-1P78426 BZW1P1-201ENST00000454901 1240 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms