Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.67□□□□□ -1.5
PDX1P52945 TPM3P3-201ENST00000521343 354 ntBASIC5.67□□□□□ -1.5
PDX1P52945 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.67□□□□□ -1.5
PDX1P52945 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.67□□□□□ -1.5
PDX1P52945 MIR1273E-201ENST00000581165 102 ntBASIC5.67□□□□□ -1.5
PDX1P52945 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 SUMO2P15-201ENST00000604285 278 ntBASIC5.67□□□□□ -1.5
PDX1P52945 AC079395.2-201ENST00000610982 737 ntBASIC5.67□□□□□ -1.5
PDX1P52945 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.67□□□□□ -1.5
PDX1P52945 AL035661.1-201ENST00000620459 1144 ntBASIC5.67□□□□□ -1.5
PDX1P52945 CU639417.4-201ENST00000623928 207 ntBASIC5.67□□□□□ -1.5
PDX1P52945 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PDX1P52945 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.67□□□□□ -1.5
PDX1P52945 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDX1P52945 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.66□□□□□ -1.5
PDX1P52945 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PDX1P52945 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PDX1P52945 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 ZNF101P1-201ENST00000435701 1720 ntBASIC5.66□□□□□ -1.5
PDX1P52945 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDX1P52945 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 RNU4-23P-201ENST00000362839 140 ntBASIC5.66□□□□□ -1.5
PDX1P52945 RNU1-59P-201ENST00000364829 162 ntBASIC5.66□□□□□ -1.5
PDX1P52945 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDX1P52945 SNORA70.9-201ENST00000384370 135 ntBASIC5.66□□□□□ -1.5
PDX1P52945 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDX1P52945 RPL23AP17-201ENST00000401064 499 ntBASIC5.66□□□□□ -1.5
PDX1P52945 RN7SKP29-201ENST00000410957 272 ntBASIC5.66□□□□□ -1.5
PDX1P52945 PTCD2P2-201ENST00000415579 1095 ntBASIC5.66□□□□□ -1.5
PDX1P52945 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.66□□□□□ -1.5
PDX1P52945 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.66□□□□□ -1.5
PDX1P52945 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.66□□□□□ -1.5
PDX1P52945 DEFA9P-201ENST00000433042 285 ntBASIC5.66□□□□□ -1.5
PDX1P52945 NDUFA5P8-201ENST00000449019 346 ntBASIC5.66□□□□□ -1.5
PDX1P52945 RPL23AP60-201ENST00000450011 454 ntBASIC5.66□□□□□ -1.5
PDX1P52945 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.66□□□□□ -1.5
PDX1P52945 RN7SL72P-201ENST00000460697 269 ntBASIC5.66□□□□□ -1.5
PDX1P52945 COPS8P2-201ENST00000473228 627 ntBASIC5.66□□□□□ -1.5
PDX1P52945 AC128716.1-201ENST00000475129 166 ntBASIC5.66□□□□□ -1.5
PDX1P52945 UBA52P7-201ENST00000486088 380 ntBASIC5.66□□□□□ -1.5
PDX1P52945 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.66□□□□□ -1.5
PDX1P52945 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.66□□□□□ -1.5
PDX1P52945 GAPDHP71-201ENST00000511530 1003 ntBASIC5.66□□□□□ -1.5
PDX1P52945 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.66□□□□□ -1.5
PDX1P52945 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.66□□□□□ -1.5
PDX1P52945 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.66□□□□□ -1.5
PDX1P52945 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.66□□□□□ -1.5
PDX1P52945 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.66□□□□□ -1.5
PDX1P52945 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PDX1P52945 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.66□□□□□ -1.5
PDX1P52945 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 U1.25-201ENST00000614085 162 ntBASIC5.66□□□□□ -1.5
PDX1P52945 U1.34-201ENST00000618578 162 ntBASIC5.66□□□□□ -1.5
PDX1P52945 U1.31-201ENST00000620022 160 ntBASIC5.66□□□□□ -1.5
PDX1P52945 AC018445.2-201ENST00000622987 260 ntBASIC5.66□□□□□ -1.5
PDX1P52945 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 OR11H2-202ENST00000641517 1085 ntBASIC5.66□□□□□ -1.5
PDX1P52945 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDX1P52945 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDX1P52945 AC235565.1-201ENST00000456962 1325 ntBASIC5.66□□□□□ -1.5
PDX1P52945 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDX1P52945 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDX1P52945 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.66□□□□□ -1.5
PDX1P52945 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.66□□□□□ -1.5
PDX1P52945 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDX1P52945 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.66□□□□□ -1.5
PDX1P52945 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.65□□□□□ -1.5
PDX1P52945 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDX1P52945 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PDX1P52945 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDX1P52945 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDX1P52945 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDX1P52945 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDX1P52945 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDX1P52945 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.65□□□□□ -1.5
PDX1P52945 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PDX1P52945 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
PDX1P52945 RPL7P58-201ENST00000402913 758 ntBASIC5.65□□□□□ -1.5
PDX1P52945 OR2AT2P-201ENST00000413438 905 ntBASIC5.65□□□□□ -1.5
PDX1P52945 NPM1P4-201ENST00000414095 812 ntBASIC5.65□□□□□ -1.5
PDX1P52945 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.65□□□□□ -1.5
PDX1P52945 RPS4XP5-201ENST00000419038 768 ntBASIC5.65□□□□□ -1.5
PDX1P52945 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDX1P52945 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.65□□□□□ -1.5
PDX1P52945 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.65□□□□□ -1.5
PDX1P52945 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.65□□□□□ -1.5
PDX1P52945 Z84478.1-201ENST00000438230 1219 ntBASIC5.65□□□□□ -1.5
PDX1P52945 XKRYP6-201ENST00000440468 1116 ntBASIC5.65□□□□□ -1.5
PDX1P52945 XKRYP3-201ENST00000442113 1116 ntBASIC5.65□□□□□ -1.5
PDX1P52945 CYCSP51-201ENST00000443545 318 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms