Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.39□□□□□ -1.39
NEK3P51956 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NEK3P51956 RNA5SP431-201ENST00000410312 120 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AL158827.1-201ENST00000416300 391 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.39□□□□□ -1.39
NEK3P51956 LDHAP2-201ENST00000437325 985 ntBASIC6.39□□□□□ -1.39
NEK3P51956 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.39□□□□□ -1.39
NEK3P51956 SOCS5P1-201ENST00000440415 949 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.39□□□□□ -1.39
NEK3P51956 HMGB1P7-201ENST00000450921 612 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AP000547.1-201ENST00000454360 617 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AL355032.1-201ENST00000472981 438 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.39□□□□□ -1.39
NEK3P51956 RPL12P31-201ENST00000478433 450 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AC092902.1-201ENST00000486999 259 ntBASIC6.39□□□□□ -1.39
NEK3P51956 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.39□□□□□ -1.39
NEK3P51956 MAST4-IT1-201ENST00000514241 658 ntBASIC6.39□□□□□ -1.39
NEK3P51956 RN7SKP141-201ENST00000516167 338 ntBASIC6.39□□□□□ -1.39
NEK3P51956 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.39□□□□□ -1.39
NEK3P51956 IGKV2-19-201ENST00000518132 283 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AP003102.1-201ENST00000525638 661 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC6.39□□□□□ -1.39
NEK3P51956 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
NEK3P51956 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.39□□□□□ -1.39
NEK3P51956 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.39□□□□□ -1.39
NEK3P51956 AC006512.2-201ENST00000543250 486 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC6.39□□□□□ -1.39
NEK3P51956 AC090651.1-201ENST00000567865 634 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AC006116.7-201ENST00000590141 756 ntBASIC6.39□□□□□ -1.39
NEK3P51956 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.39□□□□□ -1.39
NEK3P51956 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NEK3P51956 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.39□□□□□ -1.39
NEK3P51956 AL021368.3-201ENST00000607119 578 ntBASIC6.39□□□□□ -1.39
NEK3P51956 MIR8084-201ENST00000614105 89 ntBASIC6.39□□□□□ -1.39
NEK3P51956 AC018926.1-201ENST00000616335 435 ntBASIC6.39□□□□□ -1.39
NEK3P51956 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.39□□□□□ -1.39
NEK3P51956 AC119674.1-212ENST00000641155 993 ntBASIC6.39□□□□□ -1.39
NEK3P51956 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.39□□□□□ -1.39
NEK3P51956 NEPNP-201ENST00000404786 1371 ntBASIC6.39□□□□□ -1.39
NEK3P51956 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.39□□□□□ -1.39
NEK3P51956 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.39□□□□□ -1.39
NEK3P51956 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.39□□□□□ -1.39
NEK3P51956 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.39□□□□□ -1.39
NEK3P51956 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.39□□□□□ -1.39
NEK3P51956 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
NEK3P51956 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.39□□□□□ -1.39
NEK3P51956 AP000432.2-201ENST00000624164 2048 ntBASIC6.38□□□□□ -1.39
NEK3P51956 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.38□□□□□ -1.39
NEK3P51956 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
NEK3P51956 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NEK3P51956 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.38□□□□□ -1.39
NEK3P51956 RNA5SP478-201ENST00000364657 115 ntBASIC6.38□□□□□ -1.39
NEK3P51956 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 AL034374.1-201ENST00000406329 351 ntBASIC6.38□□□□□ -1.39
NEK3P51956 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.38□□□□□ -1.39
NEK3P51956 AC002069.1-201ENST00000429649 1159 ntBASIC6.38□□□□□ -1.39
NEK3P51956 RPSAP65-201ENST00000429660 595 ntBASIC6.38□□□□□ -1.39
NEK3P51956 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 IGLV3-4-201ENST00000432300 244 ntBASIC6.38□□□□□ -1.39
NEK3P51956 RNFT1P2-201ENST00000443064 757 ntBASIC6.38□□□□□ -1.39
NEK3P51956 AC079922.1-201ENST00000443291 359 ntBASIC6.38□□□□□ -1.39
NEK3P51956 RPL5P7-201ENST00000444235 813 ntBASIC6.38□□□□□ -1.39
NEK3P51956 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.38□□□□□ -1.39
NEK3P51956 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 HMGB1P5-202ENST00000451497 985 ntBASIC6.38□□□□□ -1.39
NEK3P51956 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.38□□□□□ -1.39
NEK3P51956 RPL34P33-201ENST00000486062 334 ntBASIC6.38□□□□□ -1.39
NEK3P51956 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.38□□□□□ -1.39
NEK3P51956 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.38□□□□□ -1.39
NEK3P51956 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.38□□□□□ -1.39
NEK3P51956 OR4D12P-201ENST00000509361 911 ntBASIC6.38□□□□□ -1.39
NEK3P51956 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.38□□□□□ -1.39
NEK3P51956 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.38□□□□□ -1.39
NEK3P51956 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.38□□□□□ -1.39
NEK3P51956 BCAS2P1-201ENST00000528022 632 ntBASIC6.38□□□□□ -1.39
NEK3P51956 TOMM20P1-201ENST00000534518 427 ntBASIC6.38□□□□□ -1.39
NEK3P51956 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.38□□□□□ -1.39
NEK3P51956 AC139697.1-201ENST00000548429 745 ntBASIC6.38□□□□□ -1.39
NEK3P51956 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.38□□□□□ -1.39
NEK3P51956 AL358913.1-201ENST00000554342 121 ntBASIC6.38□□□□□ -1.39
NEK3P51956 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
NEK3P51956 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.38□□□□□ -1.39
NEK3P51956 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NEK3P51956 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.38□□□□□ -1.39
NEK3P51956 AC005332.4-201ENST00000592752 579 ntBASIC6.38□□□□□ -1.39
NEK3P51956 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms