Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SMARCA4P51532 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC9.71□□□□□ -0.86
SMARCA4P51532 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SMARCA4P51532 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
SMARCA4P51532 RPL34P20-201ENST00000442771 351 ntBASIC9.71□□□□□ -0.86
SMARCA4P51532 RSU1P1-201ENST00000453416 441 ntBASIC9.71□□□□□ -0.86
SMARCA4P51532 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC9.71□□□□□ -0.86
SMARCA4P51532 AC087360.1-201ENST00000518788 616 ntBASIC9.71□□□□□ -0.86
SMARCA4P51532 RAB9BP1-201ENST00000519581 626 ntBASIC9.71□□□□□ -0.86
SMARCA4P51532 C1GALT1P3-201ENST00000522049 819 ntBASIC9.71□□□□□ -0.86
SMARCA4P51532 YWHABP2-201ENST00000540201 713 ntBASIC9.71□□□□□ -0.86
SMARCA4P51532 MIR4737-201ENST00000583979 81 ntBASIC9.71□□□□□ -0.86
SMARCA4P51532 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC9.71□□□□□ -0.86
SMARCA4P51532 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SMARCA4P51532 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SMARCA4P51532 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA4P51532 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
SMARCA4P51532 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC9.7□□□□□ -0.86
SMARCA4P51532 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC9.7□□□□□ -0.86
SMARCA4P51532 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA4P51532 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
SMARCA4P51532 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC9.7□□□□□ -0.86
SMARCA4P51532 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA4P51532 RNU1-32P-201ENST00000363937 159 ntBASIC9.7□□□□□ -0.86
SMARCA4P51532 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
SMARCA4P51532 ZDHHC20P1-204ENST00000435787 423 ntBASIC9.7□□□□□ -0.86
SMARCA4P51532 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC9.7□□□□□ -0.86
SMARCA4P51532 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC9.7□□□□□ -0.86
SMARCA4P51532 GTF2F2P1-201ENST00000511083 675 ntBASIC9.7□□□□□ -0.86
SMARCA4P51532 OR7H2P-201ENST00000513483 306 ntBASIC9.7□□□□□ -0.86
SMARCA4P51532 AC005000.1-201ENST00000536192 288 ntBASIC9.7□□□□□ -0.86
SMARCA4P51532 AL512310.9-201ENST00000553311 948 ntBASIC9.7□□□□□ -0.86
SMARCA4P51532 OR11H3P-201ENST00000554547 982 ntBASIC9.7□□□□□ -0.86
SMARCA4P51532 H3F3BP2-201ENST00000583907 357 ntBASIC9.7□□□□□ -0.86
SMARCA4P51532 NAA60-237ENST00000615865 326 ntTSL 5 BASIC9.7□□□□□ -0.86
SMARCA4P51532 AC135068.5-201ENST00000624197 983 ntBASIC9.7□□□□□ -0.86
SMARCA4P51532 MTCO1P1-201ENST00000624263 1081 ntBASIC9.7□□□□□ -0.86
SMARCA4P51532 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA4P51532 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA4P51532 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA4P51532 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA4P51532 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA4P51532 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC9.7□□□□□ -0.86
SMARCA4P51532 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA4P51532 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SMARCA4P51532 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMARCA4P51532 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
SMARCA4P51532 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMARCA4P51532 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMARCA4P51532 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC9.69□□□□□ -0.86
SMARCA4P51532 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC9.69□□□□□ -0.86
SMARCA4P51532 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
SMARCA4P51532 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
SMARCA4P51532 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC9.69□□□□□ -0.86
SMARCA4P51532 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC9.69□□□□□ -0.86
SMARCA4P51532 AC016712.1-201ENST00000431088 378 ntBASIC9.69□□□□□ -0.86
SMARCA4P51532 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC9.69□□□□□ -0.86
SMARCA4P51532 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
SMARCA4P51532 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC9.69□□□□□ -0.86
SMARCA4P51532 MIR5096-201ENST00000583713 70 ntBASIC9.69□□□□□ -0.86
SMARCA4P51532 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
SMARCA4P51532 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMARCA4P51532 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
SMARCA4P51532 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMARCA4P51532 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
SMARCA4P51532 RAD17P2-201ENST00000451754 1977 ntBASIC9.68□□□□□ -0.86
SMARCA4P51532 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
SMARCA4P51532 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC9.68□□□□□ -0.86
SMARCA4P51532 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC9.68□□□□□ -0.86
SMARCA4P51532 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC9.68□□□□□ -0.86
SMARCA4P51532 RPS4XP20-201ENST00000505751 772 ntBASIC9.68□□□□□ -0.86
SMARCA4P51532 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC9.68□□□□□ -0.86
SMARCA4P51532 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC9.68□□□□□ -0.86
SMARCA4P51532 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC9.68□□□□□ -0.86
SMARCA4P51532 IRF5P1-201ENST00000504852 2164 ntBASIC9.68□□□□□ -0.86
SMARCA4P51532 WBP11P1-201ENST00000562560 1931 ntBASIC9.68□□□□□ -0.86
SMARCA4P51532 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
SMARCA4P51532 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
SMARCA4P51532 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
SMARCA4P51532 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SMARCA4P51532 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SMARCA4P51532 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC9.67□□□□□ -0.86
SMARCA4P51532 AC058823.1-201ENST00000485315 474 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 RN7SL423P-201ENST00000486202 304 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC9.67□□□□□ -0.86
SMARCA4P51532 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC9.67□□□□□ -0.86
SMARCA4P51532 AL031320.1-201ENST00000604177 357 ntBASIC9.67□□□□□ -0.86
SMARCA4P51532 AP005432.2-201ENST00000608162 586 ntBASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms