Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 RNU6-574P-201ENST00000384265 107 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 RNU6-331P-201ENST00000384724 107 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AL122016.1-201ENST00000403365 367 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC011753.4-201ENST00000417974 311 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 FDPSP1-201ENST00000424976 1071 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 PSMD10P2-201ENST00000432890 672 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 HMGB1P45-201ENST00000435986 653 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC023512.1-201ENST00000444513 499 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 FABP3P2-201ENST00000453169 399 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC234782.3-201ENST00000461229 433 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 PDPN-205ENST00000487038 607 ntTSL 2 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AF131216.2-201ENST00000512316 564 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 RN7SKP31-201ENST00000516354 278 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 RN7SKP116-201ENST00000516902 319 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC092868.1-201ENST00000557949 802 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC133565.1-201ENST00000569218 488 ntTSL 3 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 RPL12P25-202ENST00000598100 674 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC113139.1-201ENST00000605049 239 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 RNU6-88P-201ENST00000606801 100 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC012488.1-201ENST00000611221 640 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 PFN1P2-202ENST00000621347 397 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 TEX41-265ENST00000627785 704 ntTSL 5 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC110926.1-201ENST00000412499 2825 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC104083.1-201ENST00000569449 2615 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC092725.2-201ENST00000567658 1389 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 AC104964.2-201ENST00000562242 4641 ntBASIC8.22□□□□□ -1.09
SCUBE3Q8IX30 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 CYP1D1P-201ENST00000416662 1433 ntBASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
SCUBE3Q8IX30 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 SSX9-201ENST00000376909 591 ntBASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 OR4F7P-201ENST00000402444 931 ntBASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 OR4F1P-201ENST00000405102 938 ntBASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AL354719.1-201ENST00000406535 843 ntBASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 BX295541.1-201ENST00000417774 250 ntBASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 OR4F2P-201ENST00000424047 938 ntBASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 GAPDHP32-201ENST00000433816 998 ntBASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AC002486.1-201ENST00000435098 391 ntBASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AL022237.1-201ENST00000446663 358 ntBASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 RPL10P6-201ENST00000457497 318 ntBASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 ALG13-214ENST00000482742 620 ntTSL 2 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.21□□□□□ -1.1
SCUBE3Q8IX30 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms