Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 GUCY2GP-201ENST00000479705 3222 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 NACA3P-201ENST00000359690 648 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 Y_RNA.62-201ENST00000362840 99 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 Y_RNA.465-201ENST00000384293 102 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 RNU6-348P-201ENST00000384386 107 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 MIR606-201ENST00000384851 96 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 RPL12P9-201ENST00000412942 488 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 MTCO2P12-201ENST00000427426 682 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 RPL5P13-201ENST00000462840 709 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC109462.1-201ENST00000491087 368 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AL358832.1-201ENST00000497800 389 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC026427.2-201ENST00000506228 536 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC022483.1-201ENST00000514020 567 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 IGKV2D-38-201ENST00000518423 240 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 MAL2-205ENST00000521048 575 ntTSL 4 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC015917.1-201ENST00000579654 510 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC016629.2-201ENST00000597341 199 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 RN7SL715P-201ENST00000606972 286 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 MIR6886-201ENST00000619864 61 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC135068.5-201ENST00000624197 983 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC009135.2-201ENST00000624136 1768 ntBASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 AC096745.2-201ENST00000627783 1914 ntBASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 MTCO1P23-201ENST00000415223 1526 ntBASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 AP001350.1-201ENST00000601906 1524 ntBASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 RNFT1P3-201ENST00000340898 1052 ntBASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 GIP-201ENST00000357424 716 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RSPO4Q2I0M5 CCNG1P1-201ENST00000406783 885 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms