Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC090638.1-201ENST00000498296 909 ntBASIC4.32□□□□□ -1.72
CCL20P78556 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL20P78556 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL20P78556 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.32□□□□□ -1.72
CCL20P78556 IGLV3-30-201ENST00000524362 298 ntBASIC4.32□□□□□ -1.72
CCL20P78556 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL20P78556 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.32□□□□□ -1.72
CCL20P78556 AP002004.1-206ENST00000532441 876 ntBASIC4.32□□□□□ -1.72
CCL20P78556 OR8G3P-201ENST00000533406 921 ntBASIC4.32□□□□□ -1.72
CCL20P78556 AC084121.1-201ENST00000533882 835 ntBASIC4.32□□□□□ -1.72
CCL20P78556 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.32□□□□□ -1.72
CCL20P78556 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL20P78556 AC006349.1-201ENST00000555526 235 ntBASIC4.32□□□□□ -1.72
CCL20P78556 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC4.32□□□□□ -1.72
CCL20P78556 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 AC016839.1-201ENST00000578162 867 ntBASIC4.32□□□□□ -1.72
CCL20P78556 RN7SL311P-201ENST00000579858 306 ntBASIC4.32□□□□□ -1.72
CCL20P78556 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC4.32□□□□□ -1.72
CCL20P78556 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.32□□□□□ -1.72
CCL20P78556 AC037198.3-201ENST00000616754 526 ntBASIC4.32□□□□□ -1.72
CCL20P78556 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.32□□□□□ -1.72
CCL20P78556 AC073869.8-201ENST00000641806 335 ntBASIC4.32□□□□□ -1.72
CCL20P78556 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCL20P78556 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCL20P78556 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.32□□□□□ -1.72
CCL20P78556 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CCL20P78556 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCL20P78556 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 MUC2-202ENST00000613187 4845 ntBASIC4.31□□□□□ -1.72
CCL20P78556 MAPK10-349ENST00000641767 3661 ntBASIC4.31□□□□□ -1.72
CCL20P78556 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 AC126323.6-202ENST00000568092 3511 ntBASIC4.31□□□□□ -1.72
CCL20P78556 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.31□□□□□ -1.72
CCL20P78556 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.31□□□□□ -1.72
CCL20P78556 YWHAZP4-201ENST00000392459 708 ntBASIC4.31□□□□□ -1.72
CCL20P78556 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 AL078599.1-201ENST00000402075 293 ntBASIC4.31□□□□□ -1.72
CCL20P78556 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CCL20P78556 RN7SKP29-201ENST00000410957 272 ntBASIC4.31□□□□□ -1.72
CCL20P78556 PCNPP4-201ENST00000414817 517 ntBASIC4.31□□□□□ -1.72
CCL20P78556 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.31□□□□□ -1.72
CCL20P78556 GRPEL2P2-201ENST00000421856 670 ntBASIC4.31□□□□□ -1.72
CCL20P78556 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.31□□□□□ -1.72
CCL20P78556 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC4.31□□□□□ -1.72
CCL20P78556 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.31□□□□□ -1.72
CCL20P78556 AC239800.1-201ENST00000442049 719 ntBASIC4.31□□□□□ -1.72
CCL20P78556 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCL20P78556 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.31□□□□□ -1.72
CCL20P78556 PRELID1P3-201ENST00000450055 643 ntBASIC4.31□□□□□ -1.72
CCL20P78556 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.31□□□□□ -1.72
CCL20P78556 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCL20P78556 AC005017.1-201ENST00000482002 490 ntBASIC4.31□□□□□ -1.72
CCL20P78556 RN7SL655P-201ENST00000486087 298 ntBASIC4.31□□□□□ -1.72
CCL20P78556 RPS12P31-201ENST00000491419 398 ntBASIC4.31□□□□□ -1.72
CCL20P78556 RPL15P21-201ENST00000495592 567 ntBASIC4.31□□□□□ -1.72
CCL20P78556 AC009567.2-201ENST00000502989 349 ntBASIC4.31□□□□□ -1.72
CCL20P78556 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.31□□□□□ -1.72
CCL20P78556 AC074255.1-201ENST00000511259 501 ntBASIC4.31□□□□□ -1.72
CCL20P78556 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.31□□□□□ -1.72
CCL20P78556 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.31□□□□□ -1.72
CCL20P78556 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 OR11H3P-201ENST00000554547 982 ntBASIC4.31□□□□□ -1.72
CCL20P78556 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC4.31□□□□□ -1.72
CCL20P78556 AC100832.2-201ENST00000582080 776 ntBASIC4.31□□□□□ -1.72
CCL20P78556 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.31□□□□□ -1.72
CCL20P78556 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.31□□□□□ -1.72
CCL20P78556 AC107993.1-201ENST00000591343 684 ntBASIC4.31□□□□□ -1.72
CCL20P78556 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCL20P78556 RPSAP75-201ENST00000605848 301 ntBASIC4.31□□□□□ -1.72
CCL20P78556 AC068726.1-201ENST00000610993 341 ntBASIC4.31□□□□□ -1.72
CCL20P78556 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC4.31□□□□□ -1.72
CCL20P78556 AC015871.5-202ENST00000623252 701 ntBASIC4.31□□□□□ -1.72
CCL20P78556 AC135068.5-201ENST00000624197 983 ntBASIC4.31□□□□□ -1.72
CCL20P78556 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.31□□□□□ -1.72
CCL20P78556 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCL20P78556 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCL20P78556 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CCL20P78556 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.3□□□□□ -1.72
CCL20P78556 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms