Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A1P02462 MIR4691-201ENST00000583764 85 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.62□□□□□ -1.35
COL4A1P02462 AC100827.5-201ENST00000615883 426 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 AC073342.3-201ENST00000624211 193 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL4A1P02462 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL4A1P02462 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A1P02462 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
COL4A1P02462 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A1P02462 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A1P02462 HSPA8P18-201ENST00000439846 1928 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL4A1P02462 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
COL4A1P02462 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A1P02462 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A1P02462 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A1P02462 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A1P02462 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A1P02462 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A1P02462 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A1P02462 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A1P02462 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.61□□□□□ -1.35
COL4A1P02462 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL4A1P02462 RPL23AP17-201ENST00000401064 499 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A1P02462 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A1P02462 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.61□□□□□ -1.35
COL4A1P02462 TRY2P-201ENST00000448860 689 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A1P02462 RN7SL97P-201ENST00000486780 299 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 AC122688.1-201ENST00000541494 223 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 AP002373.2-201ENST00000541631 1060 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 NPM1P42-201ENST00000560329 862 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.61□□□□□ -1.35
COL4A1P02462 MIR6810-201ENST00000622701 70 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 AC015660.5-201ENST00000623238 564 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL4A1P02462 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.61□□□□□ -1.35
COL4A1P02462 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A1P02462 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A1P02462 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A1P02462 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.61□□□□□ -1.35
COL4A1P02462 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A1P02462 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
COL4A1P02462 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
COL4A1P02462 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A1P02462 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A1P02462 RNA5SP305-201ENST00000362665 119 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 SNORD56.6-201ENST00000384569 71 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A1P02462 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A1P02462 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A1P02462 AC083982.1-201ENST00000485679 344 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A1P02462 AC109464.1-201ENST00000511091 819 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.61□□□□□ -1.35
COL4A1P02462 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A1P02462 MIR6820-201ENST00000611508 62 ntBASIC6.61□□□□□ -1.35
COL4A1P02462 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL4A1P02462 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
COL4A1P02462 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.6□□□□□ -1.35
COL4A1P02462 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.6□□□□□ -1.35
COL4A1P02462 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 RN7SKP95-201ENST00000362860 303 ntBASIC6.6□□□□□ -1.35
COL4A1P02462 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.6□□□□□ -1.35
COL4A1P02462 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.6□□□□□ -1.35
COL4A1P02462 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.6□□□□□ -1.35
COL4A1P02462 AC009127.1-201ENST00000467090 155 ntBASIC6.6□□□□□ -1.35
COL4A1P02462 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A1P02462 SCARNA16.4-201ENST00000516956 187 ntBASIC6.6□□□□□ -1.35
COL4A1P02462 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A1P02462 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.6□□□□□ -1.35
COL4A1P02462 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A1P02462 OR4F13P-202ENST00000560066 2054 ntBASIC6.6□□□□□ -1.35
COL4A1P02462 MIR4646-201ENST00000580775 63 ntBASIC6.6□□□□□ -1.35
COL4A1P02462 RN7SL356P-201ENST00000582228 248 ntBASIC6.6□□□□□ -1.35
COL4A1P02462 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.6□□□□□ -1.35
COL4A1P02462 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC6.6□□□□□ -1.35
COL4A1P02462 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
COL4A1P02462 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
COL4A1P02462 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A1P02462 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
COL4A1P02462 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.59□□□□□ -1.35
COL4A1P02462 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
COL4A1P02462 U3.3-201ENST00000362986 216 ntBASIC6.59□□□□□ -1.35
COL4A1P02462 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
COL4A1P02462 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.59□□□□□ -1.35
COL4A1P02462 PDCL3P4-201ENST00000489621 720 ntBASIC6.59□□□□□ -1.35
COL4A1P02462 AC109462.1-201ENST00000491087 368 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms