Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 SCARNA6.1-201ENST00000516989 238 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 HMGN2P36-201ENST00000529541 409 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 OR4A41P-201ENST00000533053 928 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AC019322.1-201ENST00000571869 389 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AC090286.3-201ENST00000573133 187 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 OR1E3-201ENST00000575608 948 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 MIR4502-201ENST00000580432 81 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 MIR4311-201ENST00000580794 100 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AC009120.7-201ENST00000623452 780 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AC111152.1-202ENST00000635848 339 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 AP001157.1-201ENST00000550837 2339 ntBASIC5.59□□□□□ -1.51
TRIM49D1C9J1S8 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
TRIM49D1C9J1S8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM49D1C9J1S8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM49D1C9J1S8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM49D1C9J1S8 CASC19-238ENST00000641523 1558 ntBASIC5.59□□□□□ -1.52
TRIM49D1C9J1S8 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM49D1C9J1S8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC093225.1-201ENST00000506867 1408 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 RNA5SP30-201ENST00000365552 115 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 NENFP1-201ENST00000419476 466 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 SUMO2P8-201ENST00000434672 286 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC023194.2-201ENST00000465398 406 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AL117692.1-201ENST00000494283 713 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC091874.2-201ENST00000505889 720 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC091912.1-201ENST00000511351 248 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC007956.1-201ENST00000555623 542 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC121758.1-202ENST00000556917 658 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC011500.1-201ENST00000601963 469 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 FAM27E4-201ENST00000605259 342 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC091167.5-201ENST00000605689 894 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC005828.7-201ENST00000607331 556 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 AC244517.3-201ENST00000616254 1235 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 GTF2IP4-201ENST00000453092 2054 ntBASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM49D1C9J1S8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 PPIAP9-201ENST00000403866 498 ntBASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AC009963.3-201ENST00000458090 486 ntBASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 RN7SL568P-201ENST00000493069 298 ntBASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 LDHAP1-201ENST00000509421 992 ntBASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AC018797.1-201ENST00000510791 255 ntBASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 OR7A8P-201ENST00000595427 913 ntBASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 MIR6780B-201ENST00000610307 79 ntBASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.57□□□□□ -1.52
TRIM49D1C9J1S8 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms