Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL162739.1-201ENST00000450606 307 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC099541.1-201ENST00000453828 670 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC010618.1-201ENST00000469924 477 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 PPIAP19-201ENST00000486414 492 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 IRF5-213ENST00000489702 2988 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC010368.1-201ENST00000510160 456 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC113347.2-201ENST00000512350 279 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 GMPSP1-201ENST00000514075 579 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 SCARNA23-201ENST00000516060 130 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 IGLVIV-53-201ENST00000520107 367 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 IGLVIV-59-201ENST00000520218 250 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AP001931.1-201ENST00000531074 580 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC084364.2-201ENST00000546924 395 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 PMEL-214ENST00000550447 901 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 LINGO1-AS1-203ENST00000560265 335 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC01982-201ENST00000572848 308 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 MIR4254-201ENST00000581063 76 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC053481.4-201ENST00000583164 216 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AFMID-205ENST00000586731 550 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AL606495.2-201ENST00000605867 535 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AL450472.3-201ENST00000615578 367 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 Metazoa_SRP.186-201ENST00000617234 362 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC011297.1-201ENST00000620503 2110 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AP000787.3-201ENST00000634407 307 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 XPO6-208ENST00000565698 4255 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 CLN3-238ENST00000569430 3867 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 KLK10-203ENST00000391805 3006 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 EFCAB6-201ENST00000262726 4869 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 FAM13A-222ENST00000515600 2206 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 TMEM168-206ENST00000454074 2659 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 RFX2-202ENST00000359161 3595 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 PPP2R2C-202ENST00000335585 4092 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 ADGRE5-201ENST00000242786 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 DUSP27-202ENST00000361200 4164 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 STPG1-203ENST00000374409 2804 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 PHC2-204ENST00000431992 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC022034.2-201ENST00000426023 2387 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 ASIC1-208ENST00000552438 3327 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 JADE1-201ENST00000226319 5772 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 CECR3-201ENST00000428828 1915 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC069222.1-201ENST00000608028 3360 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 RAVER1-208ENST00000617231 3501 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AK2-202ENST00000373449 3586 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 PPFIBP2-208ENST00000528883 2580 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 TP53AIP1-206ENST00000602346 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 PAK3-204ENST00000372010 2606 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 MINOS1-210ENST00000617872 3678 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 SCFD2-202ENST00000401642 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 LRRC32-203ENST00000407242 4311 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 BEST1-201ENST00000378043 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AL442125.1-201ENST00000619092 3362 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 SLC36A3-202ENST00000377713 1720 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 PDE11A-202ENST00000389683 1781 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC127502.2-201ENST00000602663 2351 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 SLC7A6OS-201ENST00000263997 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC026464.2-201ENST00000567834 2421 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 P2RX6-202ENST00000413302 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 RNU6-78P-201ENST00000362897 107 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 RN7SKP9-201ENST00000364923 299 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 Y_RNA.310-201ENST00000365063 113 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 CYB5AP4-201ENST00000396692 399 ntBASIC5.63□□□□□ -1.51
KRTAP3-3Q9BYR6 TXN2-202ENST00000403313 912 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms