Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP003033.2-201ENST00000528901 805 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 MIR3135A-201ENST00000578460 77 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 VN1R82P-201ENST00000601481 356 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC011500.1-201ENST00000601963 469 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC100793.4-201ENST00000613683 429 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC009120.7-201ENST00000623452 780 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AL078595.2-201ENST00000605309 1780 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 MTND5P17-201ENST00000418405 1603 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 AC129502.1-201ENST00000623261 1654 ntBASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
SHKBP1Q8TBC3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SHKBP1Q8TBC3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
SHKBP1Q8TBC3 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
SHKBP1Q8TBC3 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.21□□□□□ -1.25
SHKBP1Q8TBC3 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.25
SHKBP1Q8TBC3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
SHKBP1Q8TBC3 HCG18-244ENST00000602516 2890 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 RNU6-1119P-201ENST00000384349 108 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 DEFB108C-201ENST00000400154 252 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AL590084.1-201ENST00000407885 387 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 MIR548F1-201ENST00000408667 84 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AL445183.3-201ENST00000414168 502 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 RPL7P53-201ENST00000421245 739 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC128677.1-201ENST00000436016 442 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 PCNPP2-201ENST00000441651 455 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 RPL29P23-201ENST00000486188 442 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 MYL12BP2-201ENST00000503948 512 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 KRT19P6-201ENST00000510983 209 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 GTF2F2P1-201ENST00000511083 675 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC010285.3-201ENST00000511668 676 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 NDUFB4P12-201ENST00000513465 390 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AL139174.1-201ENST00000531489 886 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AP000916.1-201ENST00000533869 835 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 NXPE2P1-201ENST00000543705 726 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 NOP56P3-201ENST00000549457 385 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC022146.1-201ENST00000595307 847 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AL020997.3-201ENST00000602843 359 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 AC008498.1-201ENST00000613012 531 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 OR5AK4P-201ENST00000635912 903 ntBASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHKBP1Q8TBC3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms