Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RNU1-65P-201ENST00000363919 148 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 RNA5SP91-201ENST00000390902 119 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 METTL15P3-201ENST00000415522 1221 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC093166.4-201ENST00000457867 318 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 RNU1-88P-201ENST00000459274 128 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AL122020.1-201ENST00000472287 459 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC105384.2-201ENST00000508433 640 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 RNU6-1334P-201ENST00000516032 105 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC002069.2-201ENST00000603580 883 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC022400.9-201ENST00000623633 273 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AP005432.1-201ENST00000580891 3485 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 MFSD8-219ENST00000641228 2559 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC138907.8-201ENST00000623981 2256 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AP000473.2-201ENST00000602659 1537 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AC009962.1-201ENST00000567327 3813 ntBASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AC112198.2-201ENST00000426589 6996 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 ADAM24P-201ENST00000398655 2101 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 RNA5SP500-201ENST00000364486 119 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 RPL11P3-201ENST00000395256 523 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 BX119904.3-201ENST00000428194 957 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 DEFA9P-201ENST00000433042 285 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AC242426.1-201ENST00000435270 960 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AMYP1-201ENST00000440059 1023 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 GAPDHP71-201ENST00000511530 1003 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 WBP1LP3-201ENST00000523033 208 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AC006530.1-201ENST00000555980 571 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AL356801.1-201ENST00000559320 294 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 NANOGP3-201ENST00000605855 286 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 AC004158.1-201ENST00000564508 4319 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 LYARP1-201ENST00000436977 1501 ntBASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF439Q8NDP4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.74□□□□□ -1.65
ZNF439Q8NDP4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.74□□□□□ -1.65
ZNF439Q8NDP4 AC117409.1-201ENST00000470499 1310 ntBASIC4.74□□□□□ -1.65
ZNF439Q8NDP4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ZNF439Q8NDP4 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms