Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 SNORD56.6-201ENST00000384569 71 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AC009804.1-201ENST00000400949 179 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 DSTNP5-201ENST00000427921 523 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 NPM1P19-201ENST00000450070 712 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AC024558.1-201ENST00000505008 528 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AL355834.1-201ENST00000556602 3965 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 ZNF658B-201ENST00000602828 3408 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 RNU4-2-201ENST00000365668 141 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 RN7SL799P-201ENST00000475891 298 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 MTND6P2-201ENST00000512226 524 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AC109583.2-201ENST00000617367 129 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 AC079776.5-201ENST00000641920 211 ntBASIC8.63□□□□□ -1.03
VPS8Q8N3P4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
VPS8Q8N3P4 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 CR788268.1-201ENST00000603931 1809 ntBASIC8.62□□□□□ -1.03
VPS8Q8N3P4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 PPP2R2DP1-201ENST00000420526 637 ntBASIC8.62□□□□□ -1.03
VPS8Q8N3P4 AC108075.1-201ENST00000424692 529 ntBASIC8.62□□□□□ -1.03
VPS8Q8N3P4 RN7SL51P-201ENST00000468230 285 ntBASIC8.62□□□□□ -1.03
VPS8Q8N3P4 RN7SL222P-201ENST00000476452 299 ntBASIC8.62□□□□□ -1.03
VPS8Q8N3P4 HMGB1P44-201ENST00000508597 572 ntBASIC8.62□□□□□ -1.03
VPS8Q8N3P4 BX510359.5-201ENST00000515651 304 ntBASIC8.62□□□□□ -1.03
VPS8Q8N3P4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC8.62□□□□□ -1.03
VPS8Q8N3P4 SUMO2P15-201ENST00000604285 278 ntBASIC8.62□□□□□ -1.03
VPS8Q8N3P4 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 ATP5A1P1-201ENST00000454088 1321 ntBASIC8.61□□□□□ -1.03
VPS8Q8N3P4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 OR9K1P-201ENST00000326513 941 ntBASIC8.61□□□□□ -1.03
VPS8Q8N3P4 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 RNU1-146P-201ENST00000364015 165 ntBASIC8.61□□□□□ -1.03
VPS8Q8N3P4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 AL355433.1-201ENST00000422804 300 ntBASIC8.61□□□□□ -1.03
VPS8Q8N3P4 AC091912.1-201ENST00000511351 248 ntBASIC8.61□□□□□ -1.03
VPS8Q8N3P4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC8.61□□□□□ -1.03
VPS8Q8N3P4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms