Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC034229.6-201ENST00000623704 224 ntBASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 MTND4P10-201ENST00000446199 1363 ntBASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 AL596244.1-201ENST00000567068 3779 ntBASIC6.51□□□□□ -1.37
TRIM48Q8IWZ4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AL137918.1-201ENST00000624542 1922 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC093278.2-201ENST00000564956 2485 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 SNORA64.3-201ENST00000365647 134 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 HMGB1P10-201ENST00000395823 563 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 RAP1BP1-201ENST00000412709 553 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AL929472.1-201ENST00000417484 429 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AL390023.1-201ENST00000428836 262 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC090018.1-201ENST00000434369 367 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC245452.2-201ENST00000435222 392 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 NANOGP2-201ENST00000435391 727 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 GAPDHP37-201ENST00000442317 968 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC016772.1-201ENST00000444170 1261 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC135999.1-201ENST00000478962 479 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 RN7SL413P-201ENST00000482700 297 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC004815.1-201ENST00000484185 331 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC021146.7-201ENST00000509604 775 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 OR5BM1P-201ENST00000512021 366 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC027667.1-201ENST00000545814 304 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 OR2AS2P-201ENST00000606902 342 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC093635.1-201ENST00000609028 555 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC024257.5-201ENST00000612739 531 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AL603755.1-201ENST00000619504 163 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC067852.7-201ENST00000623270 535 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 AC007671.2-201ENST00000637344 619 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 ELL2P3-201ENST00000457883 1602 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 DDX18P5-201ENST00000534547 1306 ntBASIC6.5□□□□□ -1.37
TRIM48Q8IWZ4 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 RACGAP1P-201ENST00000550663 1879 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AL132640.2-201ENST00000559968 1698 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 RNU4-92P-201ENST00000363783 136 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 OR7E156P-201ENST00000400303 464 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 MIR541-201ENST00000401360 84 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AL049697.3-201ENST00000406493 982 ntBASIC6.49□□□□□ -1.37
TRIM48Q8IWZ4 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms