Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 CXADRP3-202ENST00000617265 1100 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 MFSD8-219ENST00000641228 2559 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC093225.1-201ENST00000506867 1408 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC010132.2-201ENST00000295493 1043 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 SNORD1C-201ENST00000363315 78 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 RPL5P19-201ENST00000404228 893 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 OR2W4P-201ENST00000406496 926 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC023141.3-201ENST00000436698 278 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AMYP1-201ENST00000440059 1023 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 ZNF619P1-201ENST00000446539 752 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 FTLP8-201ENST00000446770 267 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 OR52E7P-201ENST00000452394 933 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC068228.1-201ENST00000461723 211 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC023194.2-201ENST00000465398 406 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 SLC25A51P1-201ENST00000468432 871 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC098847.1-201ENST00000473094 348 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 SNRPCP3-201ENST00000474888 476 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC083795.1-201ENST00000491760 320 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 RPL37P23-201ENST00000492641 294 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AK4P6-201ENST00000505168 528 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 HAUS1P1-201ENST00000505275 832 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 RN7SKP35-201ENST00000517210 151 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 TPM3P3-201ENST00000521343 354 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC018442.3-201ENST00000523025 183 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC084759.1-201ENST00000561168 290 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC015722.2-201ENST00000622210 551 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 AC073488.3-201ENST00000631611 778 ntBASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NUP54Q7Z3B4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 RNU6-819P-201ENST00000364116 107 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AL096800.1-201ENST00000405326 893 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 Z85994.2-201ENST00000434327 452 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 NDUFA5P8-201ENST00000449019 346 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 PPIAP27-201ENST00000453800 265 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 C1DP3-201ENST00000455013 423 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 RPL23AP40-201ENST00000487630 390 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 LSM3P4-201ENST00000502948 309 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC117525.1-201ENST00000515228 503 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AC109635.6-201ENST00000525487 1113 ntBASIC5.59□□□□□ -1.51
NUP54Q7Z3B4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms