Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 SLC26A9-201ENST00000340781 4510 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC7.06□□□□□ -1.28
RSPO4Q2I0M5 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 SCRN3-201ENST00000272732 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 VN2R1P-201ENST00000449668 1743 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 CASC19-206ENST00000641028 1430 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 OR56B2P-201ENST00000317102 954 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 RNU4-91P-201ENST00000364778 135 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 RNU6-796P-201ENST00000391086 107 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 RN7SKP206-201ENST00000410823 293 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 MTATP6P29-201ENST00000415057 132 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC000089.1-201ENST00000424559 801 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 POU5F1P5-201ENST00000445059 658 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC007327.1-201ENST00000447461 264 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 USP9YP12-201ENST00000450481 570 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 MEF2AP1-201ENST00000454867 863 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 SETP20-201ENST00000457046 852 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 RNA5SP269-201ENST00000459032 137 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC008410.1-201ENST00000483777 339 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 RN7SL306P-201ENST00000492941 296 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC008496.1-201ENST00000509131 295 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC010342.1-201ENST00000514047 877 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 MTCO1P30-201ENST00000515244 580 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC093878.1-201ENST00000515630 432 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 RN7SKP298-201ENST00000515950 94 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC013701.1-201ENST00000522657 465 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 RPS3AP23-202ENST00000574601 686 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC015871.2-201ENST00000603605 948 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC107075.1-201ENST00000613695 314 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AL031658.2-201ENST00000616850 651 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 TMPRSS11D-201ENST00000283916 2817 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 AC137056.2-201ENST00000624055 1958 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 TDGF1P3-202ENST00000602699 2710 ntBASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RSPO4Q2I0M5 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RSPO4Q2I0M5 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms