Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GPC3P51654 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
GPC3P51654 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
GPC3P51654 AC027279.1-201ENST00000568885 4284 ntBASIC6.4□□□□□ -1.38
GPC3P51654 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
GPC3P51654 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
GPC3P51654 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
GPC3P51654 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
GPC3P51654 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
GPC3P51654 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
GPC3P51654 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.4□□□□□ -1.38
GPC3P51654 RN7SKP186-201ENST00000365371 303 ntBASIC6.4□□□□□ -1.38
GPC3P51654 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
GPC3P51654 AL357752.1-201ENST00000412817 349 ntBASIC6.4□□□□□ -1.38
GPC3P51654 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
GPC3P51654 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.4□□□□□ -1.38
GPC3P51654 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.4□□□□□ -1.38
GPC3P51654 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.4□□□□□ -1.38
GPC3P51654 RN7SL284P-201ENST00000498823 275 ntBASIC6.4□□□□□ -1.38
GPC3P51654 RPL7L1P4-201ENST00000513004 707 ntBASIC6.4□□□□□ -1.38
GPC3P51654 RNA5SP362-201ENST00000516048 118 ntBASIC6.4□□□□□ -1.38
GPC3P51654 MIR2117-201ENST00000516780 80 ntBASIC6.4□□□□□ -1.38
GPC3P51654 SCARNA6.1-201ENST00000516989 238 ntBASIC6.4□□□□□ -1.38
GPC3P51654 HMGB1P42-201ENST00000532126 553 ntBASIC6.4□□□□□ -1.38
GPC3P51654 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.4□□□□□ -1.38
GPC3P51654 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.4□□□□□ -1.38
GPC3P51654 AC007346.2-201ENST00000564816 892 ntBASIC6.4□□□□□ -1.38
GPC3P51654 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
GPC3P51654 MIR4433B-201ENST00000581329 102 ntBASIC6.4□□□□□ -1.38
GPC3P51654 MIR4505-201ENST00000582238 73 ntBASIC6.4□□□□□ -1.38
GPC3P51654 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.4□□□□□ -1.38
GPC3P51654 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
GPC3P51654 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.4□□□□□ -1.38
GPC3P51654 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.4□□□□□ -1.38
GPC3P51654 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.4□□□□□ -1.38
GPC3P51654 AC104695.2-201ENST00000605056 775 ntBASIC6.4□□□□□ -1.38
GPC3P51654 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
GPC3P51654 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.4□□□□□ -1.38
GPC3P51654 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
GPC3P51654 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
GPC3P51654 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
GPC3P51654 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
GPC3P51654 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
GPC3P51654 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
GPC3P51654 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
GPC3P51654 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.4□□□□□ -1.39
GPC3P51654 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
GPC3P51654 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
GPC3P51654 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
GPC3P51654 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
GPC3P51654 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
GPC3P51654 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.39
GPC3P51654 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.4□□□□□ -1.39
GPC3P51654 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GPC3P51654 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GPC3P51654 AC007842.1-201ENST00000597336 2039 ntBASIC6.39□□□□□ -1.39
GPC3P51654 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GPC3P51654 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
GPC3P51654 MIR143-201ENST00000385300 106 ntBASIC6.39□□□□□ -1.39
GPC3P51654 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.39□□□□□ -1.39
GPC3P51654 OR2AT2P-201ENST00000413438 905 ntBASIC6.39□□□□□ -1.39
GPC3P51654 AL596448.1-201ENST00000415024 392 ntBASIC6.39□□□□□ -1.39
GPC3P51654 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.39□□□□□ -1.39
GPC3P51654 AC092651.1-201ENST00000426110 312 ntBASIC6.39□□□□□ -1.39
GPC3P51654 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
GPC3P51654 AC073909.1-201ENST00000447112 999 ntBASIC6.39□□□□□ -1.39
GPC3P51654 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.39□□□□□ -1.39
GPC3P51654 FRG2FP-204ENST00000453982 852 ntBASIC6.39□□□□□ -1.39
GPC3P51654 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
GPC3P51654 AC009120.1-201ENST00000493458 473 ntBASIC6.39□□□□□ -1.39
GPC3P51654 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GPC3P51654 AC109481.1-201ENST00000509173 282 ntBASIC6.39□□□□□ -1.39
GPC3P51654 RNU6-615P-201ENST00000516065 106 ntBASIC6.39□□□□□ -1.39
GPC3P51654 snoU109.5-201ENST00000516231 132 ntBASIC6.39□□□□□ -1.39
GPC3P51654 SCARNA21.2-201ENST00000516600 166 ntBASIC6.39□□□□□ -1.39
GPC3P51654 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.39□□□□□ -1.39
GPC3P51654 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
GPC3P51654 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.39□□□□□ -1.39
GPC3P51654 FO393422.1-201ENST00000603908 708 ntBASIC6.39□□□□□ -1.39
GPC3P51654 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.39□□□□□ -1.39
GPC3P51654 AC022467.1-201ENST00000614738 749 ntBASIC6.39□□□□□ -1.39
GPC3P51654 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
GPC3P51654 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
GPC3P51654 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GPC3P51654 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.39□□□□□ -1.39
GPC3P51654 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
GPC3P51654 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GPC3P51654 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
GPC3P51654 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.38□□□□□ -1.39
GPC3P51654 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.38□□□□□ -1.39
GPC3P51654 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.38□□□□□ -1.39
GPC3P51654 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
GPC3P51654 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.38□□□□□ -1.39
GPC3P51654 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.38□□□□□ -1.39
GPC3P51654 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
GPC3P51654 AC117434.1-201ENST00000419971 836 ntBASIC6.38□□□□□ -1.39
GPC3P51654 AC013268.2-201ENST00000420753 337 ntBASIC6.38□□□□□ -1.39
GPC3P51654 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.38□□□□□ -1.39
GPC3P51654 GAPDHP48-201ENST00000436626 961 ntBASIC6.38□□□□□ -1.39
GPC3P51654 Z84478.1-201ENST00000438230 1219 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms