Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
BRCA2P51587 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC5.88□□□□□ -1.47
BRCA2P51587 AC131649.2-201ENST00000624925 4439 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
BRCA2P51587 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
BRCA2P51587 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
BRCA2P51587 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 AC005154.2-201ENST00000438110 379 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 AL451063.1-201ENST00000450164 1133 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 AL022319.1-201ENST00000458183 1167 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.88□□□□□ -1.47
BRCA2P51587 OR4A17P-201ENST00000526032 904 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.88□□□□□ -1.47
BRCA2P51587 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC5.88□□□□□ -1.47
BRCA2P51587 CCT8P1-201ENST00000413611 1657 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.88□□□□□ -1.47
BRCA2P51587 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.88□□□□□ -1.47
BRCA2P51587 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.88□□□□□ -1.47
BRCA2P51587 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.88□□□□□ -1.47
BRCA2P51587 PARP4P1-201ENST00000435945 2337 ntBASIC5.88□□□□□ -1.47
BRCA2P51587 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
BRCA2P51587 AL359073.1-201ENST00000448036 403 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.87□□□□□ -1.47
BRCA2P51587 GTF2F2P1-201ENST00000511083 675 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
BRCA2P51587 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC5.87□□□□□ -1.47
BRCA2P51587 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 RNA5SP447-201ENST00000363749 119 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
BRCA2P51587 AL049697.2-201ENST00000403708 294 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 AC004074.1-201ENST00000421810 1063 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 HMGN2P25-201ENST00000486956 268 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.87□□□□□ -1.47
BRCA2P51587 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.87□□□□□ -1.47
BRCA2P51587 MIR3667-201ENST00000581025 74 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.87□□□□□ -1.47
BRCA2P51587 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC5.87□□□□□ -1.47
BRCA2P51587 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.87□□□□□ -1.47
BRCA2P51587 SNORA70F-201ENST00000384142 135 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 TMA16P2-201ENST00000413187 601 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 AC023141.6-201ENST00000429418 337 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 RPL7AP52-201ENST00000458096 790 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 IGKV2D-10-201ENST00000520194 281 ntBASIC5.87□□□□□ -1.47
BRCA2P51587 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
BRCA2P51587 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.87□□□□□ -1.47
BRCA2P51587 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
BRCA2P51587 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
BRCA2P51587 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC5.87□□□□□ -1.47
BRCA2P51587 ERG-206ENST00000398911 4914 ntTSL 5 BASIC5.87□□□□□ -1.47
BRCA2P51587 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.86□□□□□ -1.47
BRCA2P51587 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
BRCA2P51587 RPL12P34-201ENST00000424532 479 ntBASIC5.86□□□□□ -1.47
BRCA2P51587 SNORA84-201ENST00000459229 133 ntBASIC5.86□□□□□ -1.47
BRCA2P51587 OR5M2P-201ENST00000529003 936 ntBASIC5.86□□□□□ -1.47
BRCA2P51587 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BRCA2P51587 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.86□□□□□ -1.47
BRCA2P51587 AC005341.1-201ENST00000571086 708 ntBASIC5.86□□□□□ -1.47
BRCA2P51587 AC053481.3-201ENST00000577881 843 ntBASIC5.86□□□□□ -1.47
BRCA2P51587 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.86□□□□□ -1.47
BRCA2P51587 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BRCA2P51587 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.86□□□□□ -1.47
BRCA2P51587 AL731556.1-201ENST00000394628 3711 ntBASIC5.86□□□□□ -1.47
BRCA2P51587 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC5.86□□□□□ -1.47
BRCA2P51587 XIST-206ENST00000434839 2865 ntTSL 5 BASIC5.86□□□□□ -1.47
BRCA2P51587 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BRCA2P51587 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
BRCA2P51587 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
BRCA2P51587 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.86□□□□□ -1.47
BRCA2P51587 AC083829.1-201ENST00000503756 657 ntBASIC5.86□□□□□ -1.47
BRCA2P51587 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.86□□□□□ -1.47
BRCA2P51587 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.86□□□□□ -1.47
BRCA2P51587 AC245389.1-201ENST00000605141 529 ntBASIC5.86□□□□□ -1.47
BRCA2P51587 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC5.86□□□□□ -1.47
BRCA2P51587 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BRCA2P51587 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
BRCA2P51587 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
BRCA2P51587 CACNA1E-205ENST00000367570 9724 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
BRCA2P51587 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
BRCA2P51587 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
BRCA2P51587 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.86□□□□□ -1.47
BRCA2P51587 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.86□□□□□ -1.47
BRCA2P51587 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC5.86□□□□□ -1.47
BRCA2P51587 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms