Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC13P31276 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
HOXC13P31276 SCARNA18.1-201ENST00000516330 83 ntBASIC6.21□□□□□ -1.42
HOXC13P31276 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC13P31276 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HOXC13P31276 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXC13P31276 IGLV3-30-201ENST00000524362 298 ntBASIC6.21□□□□□ -1.42
HOXC13P31276 OR56A7P-201ENST00000524865 941 ntBASIC6.21□□□□□ -1.42
HOXC13P31276 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC13P31276 EIF4A2P5-201ENST00000529914 499 ntBASIC6.21□□□□□ -1.42
HOXC13P31276 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC13P31276 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.21□□□□□ -1.42
HOXC13P31276 MIR132-201ENST00000591554 101 ntBASIC6.21□□□□□ -1.42
HOXC13P31276 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC13P31276 AC067838.1-201ENST00000606064 577 ntBASIC6.21□□□□□ -1.42
HOXC13P31276 MIR6793-201ENST00000612376 63 ntBASIC6.21□□□□□ -1.42
HOXC13P31276 AL355974.3-201ENST00000617383 467 ntBASIC6.21□□□□□ -1.42
HOXC13P31276 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
HOXC13P31276 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC13P31276 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HOXC13P31276 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC13P31276 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC13P31276 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC13P31276 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
HOXC13P31276 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC13P31276 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
HOXC13P31276 AC027228.2-201ENST00000567141 2154 ntBASIC6.21□□□□□ -1.42
HOXC13P31276 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC13P31276 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC13P31276 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC13P31276 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXC13P31276 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC13P31276 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXC13P31276 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC13P31276 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXC13P31276 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC13P31276 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC13P31276 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HOXC13P31276 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 AC106872.5-201ENST00000508856 1416 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 RNA5SP211-201ENST00000365516 117 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXC13P31276 RNU6-1263P-201ENST00000384601 106 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 MYL6P5-201ENST00000412707 459 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC13P31276 NMD3P2-201ENST00000421815 761 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC13P31276 SUMO2P1-206ENST00000445436 284 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 AL445466.1-201ENST00000448432 357 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 AL136038.1-201ENST00000497246 351 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 CCDC11P1-201ENST00000503137 1162 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC13P31276 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC13P31276 AC110056.1-201ENST00000525759 911 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC13P31276 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC13P31276 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXC13P31276 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC13P31276 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC13P31276 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 AL353796.1-201ENST00000561542 3241 ntBASIC6.2□□□□□ -1.42
HOXC13P31276 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXC13P31276 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXC13P31276 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC13P31276 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HOXC13P31276 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
HOXC13P31276 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
HOXC13P31276 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXC13P31276 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXC13P31276 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HOXC13P31276 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
HOXC13P31276 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.19□□□□□ -1.42
HOXC13P31276 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HOXC13P31276 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HOXC13P31276 OR9K1P-201ENST00000326513 941 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 OR10R3P-201ENST00000361688 942 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.19□□□□□ -1.42
HOXC13P31276 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.19□□□□□ -1.42
HOXC13P31276 AL035660.1-201ENST00000422041 222 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 KIF4CP-201ENST00000422742 1279 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 AC245884.2-201ENST00000426257 404 ntBASIC6.19□□□□□ -1.42
HOXC13P31276 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms