Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.25□□□□□ -1.57
SPTA1P02549 NENFP1-201ENST00000419476 466 ntBASIC5.25□□□□□ -1.57
SPTA1P02549 AC006335.2-201ENST00000437993 330 ntBASIC5.25□□□□□ -1.57
SPTA1P02549 RPS23P9-201ENST00000448848 438 ntBASIC5.25□□□□□ -1.57
SPTA1P02549 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.25□□□□□ -1.57
SPTA1P02549 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.25□□□□□ -1.57
SPTA1P02549 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SPTA1P02549 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SPTA1P02549 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 AL445528.2-201ENST00000620582 470 ntBASIC5.25□□□□□ -1.57
SPTA1P02549 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.25□□□□□ -1.57
SPTA1P02549 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SPTA1P02549 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 RPL32P3-201ENST00000359025 275 ntBASIC5.25□□□□□ -1.57
SPTA1P02549 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.25□□□□□ -1.57
SPTA1P02549 P2RY10P2-201ENST00000416730 913 ntBASIC5.25□□□□□ -1.57
SPTA1P02549 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SPTA1P02549 RPL5P22-201ENST00000480199 884 ntBASIC5.25□□□□□ -1.57
SPTA1P02549 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.25□□□□□ -1.57
SPTA1P02549 NMNAT1P5-201ENST00000559657 841 ntBASIC5.25□□□□□ -1.57
SPTA1P02549 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.25□□□□□ -1.57
SPTA1P02549 AC087269.2-201ENST00000641764 975 ntBASIC5.25□□□□□ -1.57
SPTA1P02549 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.25□□□□□ -1.57
SPTA1P02549 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.25□□□□□ -1.57
SPTA1P02549 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
SPTA1P02549 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SPTA1P02549 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SPTA1P02549 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 AC239868.2-201ENST00000564237 4527 ntBASIC5.24□□□□□ -1.57
SPTA1P02549 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC5.24□□□□□ -1.57
SPTA1P02549 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 MIR23B-201ENST00000384832 97 ntBASIC5.24□□□□□ -1.57
SPTA1P02549 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.24□□□□□ -1.57
SPTA1P02549 AL589647.1-201ENST00000402485 466 ntBASIC5.24□□□□□ -1.57
SPTA1P02549 PTCD2P2-201ENST00000415579 1095 ntBASIC5.24□□□□□ -1.57
SPTA1P02549 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.24□□□□□ -1.57
SPTA1P02549 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.24□□□□□ -1.57
SPTA1P02549 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.24□□□□□ -1.57
SPTA1P02549 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
SPTA1P02549 AL450023.1-201ENST00000450868 751 ntBASIC5.24□□□□□ -1.57
SPTA1P02549 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.24□□□□□ -1.57
SPTA1P02549 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.24□□□□□ -1.57
SPTA1P02549 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.24□□□□□ -1.57
SPTA1P02549 AC011369.2-201ENST00000624423 1567 ntBASIC5.24□□□□□ -1.57
SPTA1P02549 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC5.24□□□□□ -1.57
SPTA1P02549 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.24□□□□□ -1.57
SPTA1P02549 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.24□□□□□ -1.57
SPTA1P02549 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 MIR433-201ENST00000384837 93 ntBASIC5.24□□□□□ -1.57
SPTA1P02549 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.24□□□□□ -1.57
SPTA1P02549 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.24□□□□□ -1.57
SPTA1P02549 NRBF2P4-201ENST00000520874 850 ntBASIC5.24□□□□□ -1.57
SPTA1P02549 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.24□□□□□ -1.57
SPTA1P02549 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.24□□□□□ -1.57
SPTA1P02549 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.24□□□□□ -1.57
SPTA1P02549 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SPTA1P02549 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 AP004607.3-201ENST00000530354 3915 ntBASIC5.23□□□□□ -1.57
SPTA1P02549 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SPTA1P02549 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC5.23□□□□□ -1.57
SPTA1P02549 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SPTA1P02549 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms