Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
SNX3O60493 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SNX3O60493 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX3O60493 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX3O60493 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
SNX3O60493 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX3O60493 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SNX3O60493 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX3O60493 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 GVINP1-202ENST00000531871 7271 ntBASIC5.55□□□□□ -1.52
SNX3O60493 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 RPL11P4-201ENST00000332269 436 ntBASIC5.55□□□□□ -1.52
SNX3O60493 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNX3O60493 RNA5SP429-201ENST00000363688 109 ntBASIC5.55□□□□□ -1.52
SNX3O60493 RNA5SP85-201ENST00000365378 119 ntBASIC5.55□□□□□ -1.52
SNX3O60493 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNX3O60493 RN7SKP205-201ENST00000410999 307 ntBASIC5.55□□□□□ -1.52
SNX3O60493 NPM1P40-201ENST00000412758 733 ntBASIC5.55□□□□□ -1.52
SNX3O60493 AL360013.1-201ENST00000419031 858 ntBASIC5.55□□□□□ -1.52
SNX3O60493 AC130360.1-201ENST00000425489 1117 ntBASIC5.55□□□□□ -1.52
SNX3O60493 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNX3O60493 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX3O60493 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX3O60493 AL645936.1-201ENST00000441979 518 ntBASIC5.55□□□□□ -1.52
SNX3O60493 RAD1P2-201ENST00000446414 663 ntBASIC5.55□□□□□ -1.52
SNX3O60493 RPS7P10-201ENST00000464254 603 ntBASIC5.55□□□□□ -1.52
SNX3O60493 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX3O60493 EIF4E2P2-201ENST00000492033 736 ntBASIC5.55□□□□□ -1.52
SNX3O60493 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX3O60493 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX3O60493 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX3O60493 EIF3KP3-201ENST00000514461 639 ntBASIC5.55□□□□□ -1.52
SNX3O60493 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.55□□□□□ -1.52
SNX3O60493 AC130365.2-201ENST00000525882 1201 ntBASIC5.55□□□□□ -1.52
SNX3O60493 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.55□□□□□ -1.52
SNX3O60493 OR5AM1P-201ENST00000532136 1032 ntBASIC5.55□□□□□ -1.52
SNX3O60493 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX3O60493 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.55□□□□□ -1.52
SNX3O60493 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.55□□□□□ -1.52
SNX3O60493 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX3O60493 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 AC093524.1-201ENST00000564266 1094 ntBASIC5.55□□□□□ -1.52
SNX3O60493 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
SNX3O60493 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SNX3O60493 AP005136.2-201ENST00000583253 1049 ntBASIC5.55□□□□□ -1.52
SNX3O60493 AC108738.1-201ENST00000603703 237 ntBASIC5.55□□□□□ -1.52
SNX3O60493 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.55□□□□□ -1.52
SNX3O60493 AC100814.1-201ENST00000606963 623 ntBASIC5.55□□□□□ -1.52
SNX3O60493 AL021918.2-201ENST00000613415 194 ntBASIC5.55□□□□□ -1.52
SNX3O60493 MIR6731-201ENST00000614863 72 ntBASIC5.55□□□□□ -1.52
SNX3O60493 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX3O60493 Z83820.1-201ENST00000456978 1499 ntBASIC5.55□□□□□ -1.52
SNX3O60493 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 RBPJP7-201ENST00000442803 1447 ntBASIC5.55□□□□□ -1.52
SNX3O60493 RBPJP5-201ENST00000449433 1447 ntBASIC5.55□□□□□ -1.52
SNX3O60493 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.55□□□□□ -1.52
SNX3O60493 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SNX3O60493 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
SNX3O60493 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SNX3O60493 AC005261.6-201ENST00000623072 1387 ntBASIC5.55□□□□□ -1.52
SNX3O60493 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX3O60493 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SNX3O60493 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX3O60493 AC012254.3-201ENST00000591183 2117 ntBASIC5.54□□□□□ -1.52
SNX3O60493 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
SNX3O60493 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX3O60493 AC022417.1-201ENST00000624768 1303 ntBASIC5.54□□□□□ -1.52
SNX3O60493 AC090220.1-201ENST00000593078 1699 ntBASIC5.54□□□□□ -1.52
SNX3O60493 TCP1P3-201ENST00000414406 1498 ntBASIC5.54□□□□□ -1.52
SNX3O60493 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SNX3O60493 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNX3O60493 RNA5SP485-201ENST00000365053 119 ntBASIC5.54□□□□□ -1.52
SNX3O60493 OR1L6-202ENST00000373684 1044 ntBASIC5.54□□□□□ -1.52
SNX3O60493 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNX3O60493 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX3O60493 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SNX3O60493 MIR301B-201ENST00000390813 78 ntBASIC5.54□□□□□ -1.52
SNX3O60493 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.54□□□□□ -1.52
SNX3O60493 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.54□□□□□ -1.52
SNX3O60493 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX3O60493 OR6R1P-201ENST00000431838 940 ntBASIC5.54□□□□□ -1.52
SNX3O60493 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX3O60493 AL512637.1-201ENST00000439523 1231 ntBASIC5.54□□□□□ -1.52
SNX3O60493 CYCSP51-201ENST00000443545 318 ntBASIC5.54□□□□□ -1.52
SNX3O60493 RPS7P4-201ENST00000444127 582 ntBASIC5.54□□□□□ -1.52
SNX3O60493 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX3O60493 RN7SL269P-201ENST00000467795 305 ntBASIC5.54□□□□□ -1.52
SNX3O60493 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX3O60493 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SNX3O60493 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX3O60493 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.54□□□□□ -1.52
SNX3O60493 SNX18P25-201ENST00000510539 758 ntBASIC5.54□□□□□ -1.52
SNX3O60493 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms