Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 AL390719.1-204ENST00000412397 1219 ntBASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 AC069152.1-201ENST00000438030 544 ntBASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DRB4X5D2U9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 HLA-L-209ENST00000420110 1011 ntBASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 AC112907.3-201ENST00000577781 2400 ntBASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DRB4X5D2U9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.77□□□□□ -0.04
HLA-DRB4X5D2U9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HLA-DRB4X5D2U9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DRB4X5D2U9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DRB4X5D2U9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DRB4X5D2U9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DRB4X5D2U9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HLA-DRB4X5D2U9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 ID1-201ENST00000376105 1233 ntBASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 AC098934.4-201ENST00000564127 592 ntBASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.77□□□□□ -0.05
HLA-DRB4X5D2U9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 AC098818.2-201ENST00000564925 2320 ntBASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HLA-DRB4X5D2U9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms