Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 TUBB8P6-201ENST00000436895 1288 ntBASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DNMT3AQ9Y6K1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 AL391422.3-201ENST00000603791 2761 ntBASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 AL353807.1-201ENST00000427475 662 ntBASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DNMT3AQ9Y6K1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 MIR718-201ENST00000390190 70 ntBASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 AP001412.1-201ENST00000608405 714 ntBASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
DNMT3AQ9Y6K1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DNMT3AQ9Y6K1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
DNMT3AQ9Y6K1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
DNMT3AQ9Y6K1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 AC008550.1-201ENST00000511500 884 ntBASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DNMT3AQ9Y6K1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms